STRINGSTRING
tlr3 tlr3 ado-2 ado-2 irf5 irf5 sdccag8 sdccag8 irf3 irf3 irf6.2 irf6.2 irf6 irf6 irf7 irf7
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tlr3TIR domain-containing protein; Belongs to the Toll-like receptor family. (917 aa)
ado-22-aminoethanethiol (cysteamine) dioxygenase. (378 aa)
irf5IRF tryptophan pentad repeat domain-containing protein. (514 aa)
sdccag8Calpain 2, gene2. (591 aa)
irf3Transmembrane 6 superfamily member 2. (470 aa)
irf6.2Novel protein similar to interferon regulatory factor transcription factor. (460 aa)
irf6Novel protein similar to interferon regulatory factor transcription factor. (460 aa)
irf7Dipeptidyl-peptidase 10 (inactive). (388 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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