STRINGSTRING
cgl.1 cgl.1 LOC100496420 LOC100496420 slc5a2 slc5a2 fam171a2 fam171a2 LOC100127565 LOC100127565 angpt4 angpt4 PGM5 PGM5 LOC101732121 LOC101732121 MGC107780 MGC107780 znf217 znf217 mfap4 mfap4 fbxl12 fbxl12 angptl1 angptl1 angptl5-2 angptl5-2 fibcd1 fibcd1 LOC100127857 LOC100127857 lars2 lars2 arrdc1 arrdc1 LOC100490020 LOC100490020 fcn3-2 fcn3-2 fbxo30 fbxo30
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
cgl.1LOC100145536 protein. (304 aa)
LOC100496420Metabolism of cobalamin associated D. (345 aa)
slc5a2Kruppel-like factor 15; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (652 aa)
fam171a2Uncharacterized protein. (826 aa)
LOC100127565Serine/threonine kinase 38 like. (340 aa)
angpt4Novel protein similar to human angiopoietin-like ANGPTL. (265 aa)
PGM5Phosphoglucomutase 5; Belongs to the phosphohexose mutase family. (579 aa)
LOC101732121Uncharacterized protein. (268 aa)
MGC107780MGC107780 protein. (308 aa)
znf217Olfactory receptor family 6 subfamily A member 2. (1048 aa)
mfap4Pancreatic lipase-related protein 3. (881 aa)
fbxl12F-box domain-containing protein. (350 aa)
angptl1Angptl1 protein. (487 aa)
angptl5-2SAND domain-containing protein. (148 aa)
fibcd1Fibrinogen C domain-containing protein 1; Acetyl group-binding receptor which shows a calcium-dependent binding to acetylated structures such as chitin, some N-acetylated carbohydrates, and amino acids. (431 aa)
LOC100127857LOC100127857 protein. (333 aa)
lars2Bone morphogenetic protein 8 (osteogenic protein 2); Belongs to the class-I aminoacyl-tRNA synthetase family. (914 aa)
arrdc1Collagen, type IV, alpha 1. (471 aa)
LOC100490020Family with sequence similarity 83 member D. (399 aa)
fcn3-2Ficolin B. (321 aa)
fbxo30N-myc and STAT interactor. (861 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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