STRINGSTRING
gpx1 gpx1 actb actb gpx3 gpx3 gpx7 gpx7 hif1a-2 hif1a-2 nfe2l2 nfe2l2 cars2 cars2 gpx8 gpx8 gapdh gapdh
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gpx1Glutathione peroxidase; Belongs to the glutathione peroxidase family. (143 aa)
actbActin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
gpx3Glutathione peroxidase; Belongs to the glutathione peroxidase family. (157 aa)
gpx7Glutathione peroxidase; Belongs to the glutathione peroxidase family. (190 aa)
hif1a-2Caveolin 1. (183 aa)
nfe2l2Similar to nfe2l2 (Nuclear factor (Erythroid-derived 2)-like 2). (589 aa)
cars2Hypothetical protein LOC594893. (609 aa)
gpx8Glutathione peroxidase; Belongs to the glutathione peroxidase family. (209 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (364 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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