Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SPATA22 | hfm1 | ENSXETP00000012444 | ENSXETP00000051927 | Spermatogenesis associated 22. | Probable ATP-dependent DNA helicase HFM1; Required for crossover formation and complete synapsis of homologous chromosomes during meiosis; Belongs to the helicase family. SKI2 subfamily. | 0.556 |
| actb | cars2 | ENSXETP00000001302 | ENSXETP00000031638 | Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. | Hypothetical protein LOC594893. | 0.494 |
| actb | gapdh | ENSXETP00000001302 | ENSXETP00000036173 | Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.761 |
| actb | hif1a-2 | ENSXETP00000001302 | ENSXETP00000031610 | Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. | Caveolin 1. | 0.495 |
| actb | pxdn | ENSXETP00000001302 | ENSXETP00000021136 | Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. | Peroxidasin. | 0.534 |
| cars2 | actb | ENSXETP00000031638 | ENSXETP00000001302 | Hypothetical protein LOC594893. | Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. | 0.494 |
| cars2 | gapdh | ENSXETP00000031638 | ENSXETP00000036173 | Hypothetical protein LOC594893. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.604 |
| cars2 | pxdn | ENSXETP00000031638 | ENSXETP00000021136 | Hypothetical protein LOC594893. | Peroxidasin. | 0.694 |
| eme1 | ercc1 | ENSXETP00000042045 | ENSXETP00000019937 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.761 |
| ercc1 | eme1 | ENSXETP00000019937 | ENSXETP00000042045 | Uncharacterized protein. | ERCC4 domain-containing protein. | 0.761 |
| ercc1 | hfm1 | ENSXETP00000019937 | ENSXETP00000051927 | Uncharacterized protein. | Probable ATP-dependent DNA helicase HFM1; Required for crossover formation and complete synapsis of homologous chromosomes during meiosis; Belongs to the helicase family. SKI2 subfamily. | 0.486 |
| gapdh | actb | ENSXETP00000036173 | ENSXETP00000001302 | Glyceraldehyde-3-phosphate dehydrogenase. | Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. | 0.761 |
| gapdh | cars2 | ENSXETP00000036173 | ENSXETP00000031638 | Glyceraldehyde-3-phosphate dehydrogenase. | Hypothetical protein LOC594893. | 0.604 |
| gapdh | hif1a-2 | ENSXETP00000036173 | ENSXETP00000031610 | Glyceraldehyde-3-phosphate dehydrogenase. | Caveolin 1. | 0.604 |
| gapdh | pxdn | ENSXETP00000036173 | ENSXETP00000021136 | Glyceraldehyde-3-phosphate dehydrogenase. | Peroxidasin. | 0.743 |
| hfm1 | SPATA22 | ENSXETP00000051927 | ENSXETP00000012444 | Probable ATP-dependent DNA helicase HFM1; Required for crossover formation and complete synapsis of homologous chromosomes during meiosis; Belongs to the helicase family. SKI2 subfamily. | Spermatogenesis associated 22. | 0.556 |
| hfm1 | ercc1 | ENSXETP00000051927 | ENSXETP00000019937 | Probable ATP-dependent DNA helicase HFM1; Required for crossover formation and complete synapsis of homologous chromosomes during meiosis; Belongs to the helicase family. SKI2 subfamily. | Uncharacterized protein. | 0.486 |
| hif1a-2 | actb | ENSXETP00000031610 | ENSXETP00000001302 | Caveolin 1. | Actin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. | 0.495 |
| hif1a-2 | gapdh | ENSXETP00000031610 | ENSXETP00000036173 | Caveolin 1. | Glyceraldehyde-3-phosphate dehydrogenase. | 0.604 |
| hif1a-2 | pxdn | ENSXETP00000031610 | ENSXETP00000021136 | Caveolin 1. | Peroxidasin. | 0.694 |
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