STRINGSTRING
traf5 traf5 gpx3 gpx3 gpx7 gpx7 npy npy TRAF2 TRAF2 BCL2 BCL2 tnfrsf1a tnfrsf1a gpx8 gpx8 traf4 traf4 kiss1r kiss1r traf1 traf1 traf3 traf3 gpx1 gpx1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
traf5TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (539 aa)
gpx3Glutathione peroxidase; Belongs to the glutathione peroxidase family. (157 aa)
gpx7Glutathione peroxidase; Belongs to the glutathione peroxidase family. (190 aa)
npyNeuropeptide Y. (97 aa)
TRAF2TNF receptor-associated factor. (481 aa)
BCL2BCL2 apoptosis regulator. (293 aa)
tnfrsf1aUncharacterized protein. (413 aa)
gpx8Glutathione peroxidase; Belongs to the glutathione peroxidase family. (209 aa)
traf4TNF receptor-associated factor. (470 aa)
kiss1rG protein-coupled receptor 54 isoform 1a. (366 aa)
traf1TNF receptor-associated factor. (379 aa)
traf3TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (561 aa)
gpx1Glutathione peroxidase; Belongs to the glutathione peroxidase family. (143 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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