STRINGSTRING
h3c13-5 h3c13-5 h3c13 h3c13 actb actb ENSXETP00000002330 ENSXETP00000002330 h3c13-2 h3c13-2 h3c13-4 h3c13-4 h3-3b h3-3b gja7-2 gja7-2 ZBTB24 ZBTB24 h3c13-6 h3c13-6 h3c13-7 h3c13-7 h3c13-9 h3c13-9 h3c13-10 h3c13-10 h3c13-11 h3c13-11 lrch2-2 lrch2-2 h3c13-13 h3c13-13 h3c13-15 h3c13-15 dnmt1 dnmt1 Mavs Mavs klf11 klf11
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
h3c13-5Histone H3. (136 aa)
h3c13Histone H3.2; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (136 aa)
actbActin, cytoplasmic 1, N-terminally processed; Actin is a highly conserved protein that polymerizes to produce filaments that form cross-linked networks in the cytoplasm of cells. Actin exists in both monomeric (G-actin) and polymeric (F-actin) forms, both forms playing key functions, such as cell motility and contraction. In addition to their role in the cytoplasmic cytoskeleton, G- and F-actin also localize in the nucleus, and regulate gene transcription and motility and repair of damaged DNA. (375 aa)
ENSXETP00000002330Histone H3; Belongs to the histone H3 family. (136 aa)
h3c13-2Histone H3. (136 aa)
h3c13-4Histone H3. (136 aa)
h3-3bHistone H3.3; Variant histone H3 which replaces conventional H3 in a wide range of nucleosomes in active genes. Constitutes the predominant form of histone H3 in non-dividing cells and is incorporated into chromatin independently of DNA synthesis. Deposited at sites of nucleosomal displacement throughout transcribed genes, suggesting that it represents an epigenetic imprint of transcriptionally active chromatin. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in [...] (136 aa)
gja7-2Histone H3; Belongs to the histone H3 family. (135 aa)
ZBTB24Zinc finger and BTB domain containing 24. (646 aa)
h3c13-6Histone H3. (136 aa)
h3c13-7Histone H3. (136 aa)
h3c13-9Histone H3. (136 aa)
h3c13-10Histone H3. (136 aa)
h3c13-11Histone H3. (136 aa)
lrch2-2Histone H3; Belongs to the histone H3 family. (124 aa)
h3c13-13Histone H3. (136 aa)
h3c13-15Histone H3. (136 aa)
dnmt1DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1492 aa)
MavsCARD_2 domain-containing protein. (288 aa)
klf11Zinc finger and BTB domain containing 24. (507 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
Server load: low (36%) [HD]