STRINGSTRING
ttll5-2 ttll5-2 col4a6-2 col4a6-2 hba1 hba1 NOD1 NOD1 ERAP1 ERAP1 LOC100488329 LOC100488329 taldo1 taldo1 enpep enpep LOC548945 LOC548945 LOC108644521 LOC108644521 apob apob mfap4.1 mfap4.1 chit1 chit1 lcp1 lcp1 ANPEP ANPEP npepps npepps
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ttll5-2Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (318 aa)
col4a6-2Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (325 aa)
hba1Hemoglobin subunit alpha; Involved in oxygen transport from the lung to the various peripheral tissues. (142 aa)
NOD1Nucleotide binding oligomerization domain containing 1. (891 aa)
ERAP1Aminopeptidase. (932 aa)
LOC100488329Fibrinogen C-terminal domain-containing protein. (259 aa)
taldo1Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (339 aa)
enpepAminopeptidase. (961 aa)
LOC548945Eosinophil chemotactic cytokine; Belongs to the glycosyl hydrolase 18 family. (491 aa)
LOC108644521Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. (256 aa)
apobProbable ATP-dependent RNA helicase ddx6. (4594 aa)
mfap4.1Fibrinogen C-terminal domain-containing protein. (254 aa)
chit1Chitinase 1 (Chitotriosidase); Belongs to the glycosyl hydrolase 18 family. (492 aa)
lcp1Sorting nexin 5. (635 aa)
ANPEPAminopeptidase. (977 aa)
npeppsAminopeptidase. (971 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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