STRINGSTRING
bax bax gapdh gapdh casp3.2 casp3.2 gstt1 gstt1 gpx8 gpx8 gpx1 gpx1 gpx3 gpx3 gpx7 gpx7 casp3.1 casp3.1 cyp1a1 cyp1a1 gstt1-2 gstt1-2 BCL2 BCL2 cyp2e1 cyp2e1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
baxBCL2-associated X protein. (221 aa)
gapdhGlyceraldehyde-3-phosphate dehydrogenase. (364 aa)
casp3.2Uncharacterized protein; Belongs to the peptidase C14A family. (288 aa)
gstt1Uncharacterized protein; Belongs to the GST superfamily. (242 aa)
gpx8Glutathione peroxidase; Belongs to the glutathione peroxidase family. (209 aa)
gpx1Glutathione peroxidase; Belongs to the glutathione peroxidase family. (143 aa)
gpx3Glutathione peroxidase; Belongs to the glutathione peroxidase family. (157 aa)
gpx7Glutathione peroxidase; Belongs to the glutathione peroxidase family. (190 aa)
casp3.1Uncharacterized protein; Belongs to the peptidase C14A family. (276 aa)
cyp1a1Cytochrome P450 family 1 subfamily A polypeptide 1; Belongs to the cytochrome P450 family. (525 aa)
gstt1-2Apoptosis enhancing nuclease; Belongs to the GST superfamily. (244 aa)
BCL2BCL2 apoptosis regulator. (293 aa)
cyp2e1Uncharacterized protein; Belongs to the cytochrome P450 family. (496 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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