STRINGSTRING
marchf6 marchf6 march10 march10 MARCHF11 MARCHF11 marchf8 marchf8 marchf9 marchf9 marchf1 marchf1 marchf5 marchf5 marchf7 marchf7 marchf4 marchf4 marchf3 marchf3 marchf2 marchf2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
marchf6WNT inhibitory factor 1. (918 aa)
march10RING-CH-type domain-containing protein. (688 aa)
MARCHF11Membrane associated ring-CH-type finger 11. (294 aa)
marchf8E3 ubiquitin-protein ligase MARCHF8; E3 ubiquitin-protein ligase that mediates ubiquitination of cd86 and MHC class II proteins, such as hla-dr alpha and beta, and promotes their subsequent endocytosis and sorting to lysosomes via multivesicular bodies. (602 aa)
marchf9GDP-mannose 4,6-dehydratase. (333 aa)
marchf1Ubiquitin conjugating enzyme E2 A. (475 aa)
marchf5E3 ubiquitin-protein ligase XIAP. (283 aa)
marchf7Bombesin like receptor 3. (733 aa)
marchf4Klotho. (391 aa)
marchf3E3 ubiquitin-protein ligase MARCHF3; E3 ubiquitin-protein ligase which may be involved in endosomal trafficking. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfer the ubiquitin to targeted substrates. (252 aa)
marchf2E3 ubiquitin-protein ligase MARCHF2; E3 ubiquitin-protein ligase which may be involved in endosomal trafficking. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfer the ubiquitin to targeted substrates. (258 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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