STRINGSTRING
PDE6B PDE6B LOC100489435 LOC100489435 calm2 calm2 grk1 grk1 SLC24A1 SLC24A1 LOC101731116 LOC101731116 rcvrn.1 rcvrn.1 sag sag gngt1 gngt1 guca1b guca1b grk7 grk7 pde6g pde6g GUCY2F GUCY2F gnb1 gnb1 calml4 calml4 rcvrn.2 rcvrn.2 pde6a pde6a gnat2 gnat2 guca1a guca1a GUCA1C GUCA1C amacr-2 amacr-2 guca1al guca1al gucy2d gucy2d rho rho gnat1 gnat1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PDE6BPhosphodiesterase. (847 aa)
LOC100489435Guanylate cyclase. (1103 aa)
calm2Calmodulin 1 (Phosphorylase kinase, delta); Belongs to the calmodulin family. (149 aa)
grk1G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (559 aa)
SLC24A1Solute carrier family 24 member 1; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (724 aa)
LOC101731116Phospholipase C gamma 2. (240 aa)
rcvrn.1F-box and WD repeat domain containing 7. (202 aa)
sagS-antigen; retina and pineal gland (Arrestin). (395 aa)
gngt1Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (73 aa)
guca1bUncharacterized protein. (233 aa)
grk7G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (551 aa)
pde6gLOC100124827 protein. (87 aa)
GUCY2FGuanylate cyclase. (1133 aa)
gnb1Guanine nucleotide binding protein (G protein), beta polypeptide 2. (340 aa)
calml4Calmodulin-like protein 4; Belongs to the calmodulin family. (153 aa)
rcvrn.2Collagen type XVIII alpha 1. (193 aa)
pde6aPhosphodiesterase. (866 aa)
gnat2Uncharacterized protein. (354 aa)
guca1aLOC100124863 protein. (203 aa)
GUCA1CGuanylate cyclase activator 1C. (200 aa)
amacr-2Alpha-methylacyl-CoA racemase. (638 aa)
guca1alGuanylate cyclase activator 1A (Retina). (188 aa)
gucy2dGuanylate cyclase. (1081 aa)
rhoRhodopsin. (354 aa)
gnat1THAP domain containing 7. (350 aa)
Your Current Organism:
Xenopus tropicalis
NCBI taxonomy Id: 8364
Other names: Silurana tropicalis, X. tropicalis, Xenopus (Silurana) tropicalis, Xenopus laevis tropicalis, tropical clawed frog, western clawed frog
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