STRINGSTRING
gmk_1 gmk_1 pucK pucK xpt xpt adeC adeC thyA1 thyA1 dfrA dfrA add add sulD sulD folP folP OOL92689.1 OOL92689.1 thrS thrS purR_1 purR_1 mazG mazG fhs fhs aroK_2 aroK_2 nrdJ nrdJ OOL89944.1 OOL89944.1 purH_1 purH_1 pdp pdp deoB deoB nupC nupC deoC2 deoC2 cdd cdd carB_1 carB_1 pyrC pyrC apt apt glyA glyA dut dut purA purA folE folE purE purE purC purC purF purF purM purM purN purN purH_2 purH_2 purD purD ghrB ghrB yfkN yfkN purL purL folD folD punA punA purB purB fchA fchA OOL86676.1 OOL86676.1 nrdA nrdA nrdB nrdB deoD deoD OOL85598.1 OOL85598.1 uraA uraA pyrR pyrR grxC grxC adeQ adeQ guaB guaB guaA guaA pyrB pyrB pyrI pyrI pyrF pyrF pyrK_2 pyrK_2 pyrD_2 pyrD_2 carA carA carB_2 carB_2 dcd dcd pyrE pyrE gcvT gcvT mtaD mtaD thyX thyX zupT zupT tdk tdk OOL84287.1 OOL84287.1 prmC prmC prfA prfA OOL84290.1 OOL84290.1 ywlE ywlE rpiB rpiB upp upp OOL84297.1 OOL84297.1 fgs fgs
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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gmk_1Guanylate kinase. (195 aa)
pucKUric acid permease PucK. (434 aa)
xptXanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. (190 aa)
adeCAdenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family. (572 aa)
thyA1Thymidylate synthase 1; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. (263 aa)
dfrADihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. (153 aa)
addAdenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily. (335 aa)
sulDBifunctional folate synthesis protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. (275 aa)
folPDihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. (268 aa)
OOL92689.1Phosphodiesterase. (161 aa)
thrSthreonine--tRNA ligase 1. (553 aa)
purR_1Pur operon repressor. (269 aa)
mazGNucleoside triphosphate pyrophosphohydrolase. (494 aa)
fhsFormate--tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. (556 aa)
aroK_2Shikimate kinase. (170 aa)
nrdJVitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. (986 aa)
OOL89944.1FRG domain protein. (470 aa)
purH_1Bifunctional purine biosynthesis protein PurH. (391 aa)
pdpPyrimidine-nucleoside phosphorylase. (433 aa)
deoBPhosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (393 aa)
nupCNucleoside permease NupC; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family. (393 aa)
deoC2Deoxyribose-phosphate aldolase 2; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (215 aa)
cddCytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (131 aa)
carB_1Carbamoyl-phosphate synthase large chain. (315 aa)
pyrCDihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. (424 aa)
aptAdenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (172 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (411 aa)
dutDeoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. (146 aa)
purAAdenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. (428 aa)
folEGTP cyclohydrolase 1. (195 aa)
purEN5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR). (159 aa)
purCPhosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family. (235 aa)
purFAmidophosphoribosyltransferase precursor; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. (475 aa)
purMPhosphoribosylformylglycinamidine cyclo-ligase. (332 aa)
purNPhosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. (204 aa)
purH_2Bifunctional purine biosynthesis protein PurH. (499 aa)
purDPhosphoribosylamine--glycine ligase; Belongs to the GARS family. (416 aa)
ghrBGlyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (315 aa)
yfkNTrifunctional nucleotide phosphoesterase protein YfkN precursor. (1194 aa)
purLPhosphoribosylformylglycinamidine synthase 2. (1255 aa)
folDBifunctional protein FolD protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (278 aa)
punAPurine nucleoside phosphorylase 1; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. (268 aa)
purBAdenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (476 aa)
fchAMethenyltetrahydrofolate cyclohydrolase. (211 aa)
OOL86676.1Hypothetical protein. (150 aa)
nrdARibonucleoside-diphosphate reductase 1 subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (742 aa)
nrdBRibonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (344 aa)
deoDPurine nucleoside phosphorylase DeoD-type. (253 aa)
OOL85598.1Putative 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. (183 aa)
uraAUracil permease. (431 aa)
pyrRBifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. (178 aa)
grxCGlutaredoxin-3. (76 aa)
adeQAdenine permease AdeQ. (430 aa)
guaBInosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. (485 aa)
guaAGMP synthase; Catalyzes the synthesis of GMP from XMP. (510 aa)
pyrBAspartate carbamoyltransferase catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (307 aa)
pyrIAspartate carbamoyltransferase regulatory chain. (146 aa)
pyrFOrotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily. (288 aa)
pyrK_2Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). (246 aa)
pyrD_2Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate. (300 aa)
carACarbamoyl-phosphate synthase small chain; Belongs to the CarA family. (370 aa)
carB_2Carbamoyl-phosphate synthase large chain. (1065 aa)
dcdDeoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. (173 aa)
pyrEOrotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). (224 aa)
gcvTAminomethyltransferase; Belongs to the GcvT family. (366 aa)
mtaD5-methylthioadenosine/S-adenosylhomocysteine deaminase. (442 aa)
thyXThymidylate synthase ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. (439 aa)
zupTZinc transporter ZupT. (251 aa)
tdkThymidine kinase. (199 aa)
OOL84287.1Hypothetical protein. (317 aa)
prmCRelease factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. (285 aa)
prfAPeptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. (359 aa)
OOL84290.1Hypothetical protein. (192 aa)
ywlELow molecular weight protein-tyrosine-phosphatase YwlE. (150 aa)
rpiBRibose-5-phosphate isomerase B. (152 aa)
uppUracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. (209 aa)
OOL84297.1Cytidine and deoxycytidylate deaminase zinc-binding region. (162 aa)
fgsFolylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family. (453 aa)
Your Current Organism:
Clostridium roseum
NCBI taxonomy Id: 84029
Other names: ATCC 17797, C. roseum, DSM 7320
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