(75 nodes) SCF ubiquitin ligase complex network (Labeo rohita)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ROHU_026720	F-box only 44-like protein. (253 aa)
	ROHU_011452	F-box LRR-repeat 15. (298 aa)
	ROHU_011244	F-box only 48-like protein. (152 aa)
	ROHU_007312	F-box LRR-repeat 7. (442 aa)
	ROHU_011149	SPRY domain-containing SOCS box 1. (312 aa)
	ROHU_008767	F-box DNA helicase 1-like protein. (1407 aa)
	ROHU_031894	SPRY domain-containing SOCS box 2-like protein. (313 aa)
	ROHU_037021	F-box LRR-repeat 19-like isoform X1. (711 aa)
	ROHU_028136	F-box and leucine-rich 22. (227 aa)
	ROHU_000506	F-box LRR-repeat 19-like isoform X1. (139 aa)
	ROHU_008117	F-box only 42. (308 aa)
	ROHU_031157	F-box only 25-like isoform X1. (318 aa)
	ROHU_030204	F-box only 44-like isoform X1. (653 aa)
	ROHU_010980	F-box only 6-like protein. (523 aa)
	ROHU_031760	F-box only 15 isoform X1. (391 aa)
	ROHU_012868	S-phase kinase-associated 1; Belongs to the SKP1 family. (212 aa)
	ROHU_019246	F-box LRR-repeat 17. (169 aa)
	ROHU_017349	SPRY domain-containing SOCS box 4-like protein. (258 aa)
	ROHU_017378	F-box LRR-repeat 3. (430 aa)
	ROHU_016781	F-box LRR-repeat 4-like protein. (692 aa)
	ROHU_015985	Chondroadherin. (515 aa)
	ROHU_004351	Dynein assembly factor with WDR repeat domains 1. (260 aa)
	ROHU_003983	F-box LRR-repeat 6-like protein. (255 aa)
	ROHU_003982	F-box LRR-repeat 6. (188 aa)
	ROHU_014408	F-box LRR-repeat 21. (436 aa)
	ROHU_031956	F-box only 7. (409 aa)
	ROHU_035341	F-box LRR-repeat 5. (1121 aa)
	ROHU_033497	Cullin-1; Belongs to the cullin family. (772 aa)
	ROHU_017438	F-box WD repeat-containing 8. (630 aa)
	ROHU_013026	Cullin-2; Belongs to the cullin family. (693 aa)
	ROHU_013102	Cullin-1; Belongs to the cullin family. (746 aa)
	ROHU_019247	F-box LRR-repeat 17. (133 aa)
	ROHU_018400	F-box LRR-repeat 3-like protein. (445 aa)
	ROHU_021381	F-box LRR-repeat 14. (400 aa)
	ROHU_005842	F-box WD repeat-containing 11-like isoform X2. (380 aa)
	ROHU_021622	Cullin-1; Belongs to the cullin family. (327 aa)
	ROHU_020469	S-phase kinase-associated 2-like isoform X2. (1190 aa)
	ROHU_020122	F-box only 33. (484 aa)
	ROHU_032775	Transmembrane protein 183A. (360 aa)
	ROHU_005309	F-box only 50. (237 aa)
	ROHU_014942	F-box LRR-repeat 20. (458 aa)
	ROHU_013314	SPRY domain-containing SOCS box 4. (335 aa)
	ROHU_026721	F-box only 44-like protein. (494 aa)
	ROHU_010724	F-box only 6-like protein. (672 aa)
	ROHU_029817	Cullin-2; Belongs to the cullin family. (695 aa)
	ROHU_022729	F-box LRR-repeat 7-like protein. (492 aa)
	ROHU_006637	F-box only 9 isoform X1. (317 aa)
	ROHU_020232	F-box only 7. (409 aa)
	ROHU_020732	F-box LRR-repeat 2 isoform X2. (232 aa)
	ROHU_005683	F-box LRR-repeat 16-like protein. (487 aa)
	ROHU_022788	F-box LRR-repeat 14. (411 aa)
	ROHU_021623	Cullin-1; Belongs to the cullin family. (456 aa)
	ROHU_022485	F-box LRR-repeat 2-like protein. (884 aa)
	ROHU_006309	Cyclin-F; Belongs to the cyclin family. (744 aa)
	ROHU_024737	Calcyclin-binding-like protein. (323 aa)
	ROHU_017561	F-box WD repeat-containing 4. (330 aa)
	ROHU_007477	AMN1-like protein. (230 aa)
	ROHU_006486	F-box only 2-like protein. (354 aa)
	ROHU_025666	F-box WD repeat-containing 11-like protein. (493 aa)
	ROHU_024588	F-box LRR-repeat 3. (493 aa)
	ROHU_030202	F-box only 6-like isoform X3. (104 aa)
	ROHU_008686	F-box SPRY domain-containing 1. (291 aa)
	ROHU_008211	F-box only 44-like protein. (216 aa)
	ROHU_026981	SPRY domain-containing SOCS box 3-like isoform X1. (173 aa)
	ROHU_027127	F-box LRR-repeat 19-like isoform X1. (193 aa)
	ROHU_008118	F-box only 42. (338 aa)
	ROHU_024623	Dynein assembly factor with WDR repeat domains 1. (312 aa)
	ROHU_008256	F-box LRR-repeat 14. (411 aa)
	ROHU_003078	F-box 44. (123 aa)
	ROHU_007195	F-box LRR-repeat 13 isoform X2; Belongs to the peptidase S1 family. (645 aa)
	ROHU_002886	E3 ubiquitin-ligase RBX1. (108 aa)
	ROHU_002346	Cyclin-F. (285 aa)
	ROHU_001329	F-box only 44-like protein. (81 aa)
	ROHU_024913	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (78 aa)
	ROHU_028106	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (965 aa)

Your Current Organism:

Labeo rohita

NCBI taxonomy Id: 84645
Other names: Cyprinus rohita, Jayanti rohu, L. rohita, rohu

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ROHU_000506	ROHU_002886	A0A498P4F5	A0A498NYN6	F-box LRR-repeat 19-like isoform X1.	E3 ubiquitin-ligase RBX1.	0.849
ROHU_000506	ROHU_005842	A0A498P4F5	A0A498N9E2	F-box LRR-repeat 19-like isoform X1.	F-box WD repeat-containing 11-like isoform X2.	0.504
ROHU_000506	ROHU_006637	A0A498P4F5	A0A498N3I3	F-box LRR-repeat 19-like isoform X1.	F-box only 9 isoform X1.	0.761
ROHU_000506	ROHU_012868	A0A498P4F5	A0A498NE74	F-box LRR-repeat 19-like isoform X1.	S-phase kinase-associated 1; Belongs to the SKP1 family.	0.999
ROHU_000506	ROHU_013102	A0A498P4F5	A0A498LED4	F-box LRR-repeat 19-like isoform X1.	Cullin-1; Belongs to the cullin family.	0.885
ROHU_000506	ROHU_015985	A0A498P4F5	A0A498NM20	F-box LRR-repeat 19-like isoform X1.	Chondroadherin.	0.849
ROHU_000506	ROHU_020469	A0A498P4F5	A0A498N8U1	F-box LRR-repeat 19-like isoform X1.	S-phase kinase-associated 2-like isoform X2.	0.635
ROHU_000506	ROHU_021622	A0A498P4F5	A0A498N999	F-box LRR-repeat 19-like isoform X1.	Cullin-1; Belongs to the cullin family.	0.874
ROHU_000506	ROHU_021623	A0A498P4F5	A0A498MU39	F-box LRR-repeat 19-like isoform X1.	Cullin-1; Belongs to the cullin family.	0.885
ROHU_000506	ROHU_025666	A0A498P4F5	A0A498MJF9	F-box LRR-repeat 19-like isoform X1.	F-box WD repeat-containing 11-like protein.	0.504
ROHU_000506	ROHU_027127	A0A498P4F5	A0A498MAX8	F-box LRR-repeat 19-like isoform X1.	F-box LRR-repeat 19-like isoform X1.	0.837
ROHU_000506	ROHU_031157	A0A498P4F5	A0A498LTF6	F-box LRR-repeat 19-like isoform X1.	F-box only 25-like isoform X1.	0.466
ROHU_000506	ROHU_033497	A0A498P4F5	A0A498LHS1	F-box LRR-repeat 19-like isoform X1.	Cullin-1; Belongs to the cullin family.	0.885
ROHU_001329	ROHU_002886	A0A498P1Y8	A0A498NYN6	F-box only 44-like protein.	E3 ubiquitin-ligase RBX1.	0.577
ROHU_001329	ROHU_005842	A0A498P1Y8	A0A498N9E2	F-box only 44-like protein.	F-box WD repeat-containing 11-like isoform X2.	0.580
ROHU_001329	ROHU_012868	A0A498P1Y8	A0A498NE74	F-box only 44-like protein.	S-phase kinase-associated 1; Belongs to the SKP1 family.	0.826
ROHU_001329	ROHU_013102	A0A498P1Y8	A0A498LED4	F-box only 44-like protein.	Cullin-1; Belongs to the cullin family.	0.616
ROHU_001329	ROHU_015985	A0A498P1Y8	A0A498NM20	F-box only 44-like protein.	Chondroadherin.	0.577
ROHU_001329	ROHU_017438	A0A498P1Y8	A0A498LHR4	F-box only 44-like protein.	F-box WD repeat-containing 8.	0.480
ROHU_001329	ROHU_020232	A0A498P1Y8	A0A498N3A6	F-box only 44-like protein.	F-box only 7.	0.480