16 items (Chelonia mydas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UY3_18787	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (204 aa)
	UY3_05082	GTPase Era. (411 aa)
	UY3_09343	Uncharacterized protein. (429 aa)
	UY3_05383	28S ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (153 aa)
	PRKDC	DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family. (4085 aa)
	UY3_06171	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (145 aa)
	UY3_12973	40S ribosomal protein S27. (113 aa)
	UY3_09344	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (216 aa)
	RPS27	40S ribosomal protein S27. (84 aa)
	MRPS7	28S ribosomal protein S7. (298 aa)
	XRCC5	X-ray repair cross-complementing protein 5. (843 aa)
	UY3_11358	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	UY3_13800	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (198 aa)
	PWP2	Periodic tryptophan protein 2 like protein. (922 aa)
	UY3_17440	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family. (312 aa)
	RPS27L	40S ribosomal protein S27. (115 aa)

Your Current Organism:

Chelonia mydas

NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MRPS7	PWP2	M7B6E3	M7B0V7	28S ribosomal protein S7.	Periodic tryptophan protein 2 like protein.	0.728
MRPS7	RPS27	M7B6E3	M7B7S6	28S ribosomal protein S7.	40S ribosomal protein S27.	0.835
MRPS7	RPS27L	M7B6E3	M7AW28	28S ribosomal protein S7.	40S ribosomal protein S27.	0.835
MRPS7	UY3_05082	M7B6E3	M7C0C1	28S ribosomal protein S7.	GTPase Era.	0.983
MRPS7	UY3_05383	M7B6E3	M7BHV7	28S ribosomal protein S7.	28S ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.995
MRPS7	UY3_06171	M7B6E3	M7BHJ9	28S ribosomal protein S7.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.805
MRPS7	UY3_11358	M7B6E3	M7B374	28S ribosomal protein S7.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.857
MRPS7	UY3_12973	M7B6E3	M7BCQ2	28S ribosomal protein S7.	40S ribosomal protein S27.	0.835
MRPS7	UY3_17440	M7B6E3	M7B099	28S ribosomal protein S7.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits; Belongs to the universal ribosomal protein uS2 family.	0.946
MRPS7	UY3_18787	M7B6E3	M7AN46	28S ribosomal protein S7.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.805
PRKDC	XRCC5	M7BHM1	M7B3K2	DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family.	X-ray repair cross-complementing protein 5.	0.980
PWP2	MRPS7	M7B0V7	M7B6E3	Periodic tryptophan protein 2 like protein.	28S ribosomal protein S7.	0.728
PWP2	RPS27	M7B0V7	M7B7S6	Periodic tryptophan protein 2 like protein.	40S ribosomal protein S27.	0.769
PWP2	RPS27L	M7B0V7	M7AW28	Periodic tryptophan protein 2 like protein.	40S ribosomal protein S27.	0.769
PWP2	UY3_05383	M7B0V7	M7BHV7	Periodic tryptophan protein 2 like protein.	28S ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.	0.811
PWP2	UY3_09343	M7B0V7	M7BNA0	Periodic tryptophan protein 2 like protein.	Uncharacterized protein.	0.728
PWP2	UY3_09344	M7B0V7	M7B8M4	Periodic tryptophan protein 2 like protein.	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.906
PWP2	UY3_11358	M7B0V7	M7B374	Periodic tryptophan protein 2 like protein.	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.	0.915
PWP2	UY3_12973	M7B0V7	M7BCQ2	Periodic tryptophan protein 2 like protein.	40S ribosomal protein S27.	0.748
PWP2	UY3_13800	M7B0V7	M7B106	Periodic tryptophan protein 2 like protein.	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.	0.906