STRINGSTRING
UY3_07069 UY3_07069 RPS18 RPS18 UY3_16403 UY3_16403 UY3_18443 UY3_18443 UY3_12277 UY3_12277 PWP2 PWP2 UY3_11358 UY3_11358 HEATR1 HEATR1 UTP4 UTP4 DIEXF DIEXF UY3_05383 UY3_05383 UY3_14153 UY3_14153 AP1M2 AP1M2 UTP3 UTP3 UY3_03515 UY3_03515 UY3_12057 UY3_12057 UTP6 UTP6 RPP40 RPP40 UY3_05883 UY3_05883 TSR1 TSR1 RPS8 RPS8 UY3_00500 UY3_00500 UY3_03514 UY3_03514 UY3_06310 UY3_06310 UY3_00717 UY3_00717
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UY3_0706940S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (81 aa)
RPS18WD repeat-containing protein 46. (1177 aa)
UY3_16403Putative ATP-dependent RNA helicase DHX37. (1098 aa)
UY3_18443WD repeat-containing protein 43. (721 aa)
UY3_12277Pumilio domain-containing protein C14orf21. (532 aa)
PWP2Periodic tryptophan protein 2 like protein. (922 aa)
UY3_1135840S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
HEATR1HEAT repeat-containing protein 1. (2124 aa)
UTP4Cirhin. (509 aa)
DIEXFDigestive organ expansion factor like protein. (471 aa)
UY3_0538328S ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family. (153 aa)
UY3_14153Ribosome biogenesis protein BMS1 like protein. (1531 aa)
AP1M2AP-1 complex subunit mu-2; Belongs to the adaptor complexes medium subunit family. (1186 aa)
UTP3Something about silencing protein 10. (483 aa)
UY3_03515DDB1-and CUL4-associated factor 13. (266 aa)
UY3_12057Bystin. (412 aa)
UTP6U3 small nucleolar RNA-associated protein 6 like protein. (596 aa)
RPP40Ribonuclease P protein subunit p40. (363 aa)
UY3_05883Transducin beta-like protein 3. (723 aa)
TSR1Pre-rRNA-processing protein TSR1 like protein. (990 aa)
RPS840S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (198 aa)
UY3_00500DNA helicase B. (600 aa)
UY3_03514DDB1-and CUL4-associated factor 13. (252 aa)
UY3_0631040S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (370 aa)
UY3_00717Nucleolar protein 10. (454 aa)
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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