STRINGSTRING
UY3_06549 UY3_06549 UY3_01357 UY3_01357 UY3_01964 UY3_01964 CFAP100 CFAP100 TPR TPR UY3_01963 UY3_01963 SMC3 SMC3 UY3_01476 UY3_01476 FMR1 FMR1 UY3_04109 UY3_04109 GPSM2 GPSM2 CENPF CENPF UY3_16759 UY3_16759 UY3_13086 UY3_13086 UY3_14364 UY3_14364 DCTN6 DCTN6 UY3_18976 UY3_18976 UY3_15995 UY3_15995 UY3_11699 UY3_11699 BICD1 BICD1 FBXW11 FBXW11 UY3_19120 UY3_19120 UY3_14360 UY3_14360 UY3_15022 UY3_15022 UY3_18978 UY3_18978 PAFAH1B1 PAFAH1B1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UY3_06549ATM interactor. (758 aa)
UY3_01357Amine oxidase. (588 aa)
UY3_01964Uncharacterized protein. (469 aa)
CFAP100Coiled-coil domain-containing protein 37. (537 aa)
TPRNucleoprotein TPR. (2177 aa)
UY3_01963Nucleoside diphosphate kinase. (354 aa)
SMC3Structural maintenance of chromosomes protein 3. (1488 aa)
UY3_01476Dynein assembly factor 1, axonemal; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (973 aa)
FMR1Fragile X mental retardation protein 1 like protein. (794 aa)
UY3_04109Nucleoprotein TPR. (156 aa)
GPSM2G-protein-signaling modulator 2. (644 aa)
CENPFCentromere protein F. (1264 aa)
UY3_16759Nuclear mitotic apparatus protein 1. (2382 aa)
UY3_13086Leucine-rich repeat-containing protein 67. (150 aa)
UY3_14364Protein bicaudal D like protein 1. (151 aa)
DCTN6Dynactin subunit 6. (196 aa)
UY3_18976L-amino-acid oxidase. (440 aa)
UY3_15995Coiled-coil domain-containing protein 38. (453 aa)
UY3_11699Centromere protein F. (1869 aa)
BICD1Protein bicaudal D like protein 1. (143 aa)
FBXW11F-box/WD repeat-containing protein 11. (444 aa)
UY3_19120Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (811 aa)
UY3_14360Protein bicaudal D like protein 1. (974 aa)
UY3_15022Protein bicaudal D like protein 2. (771 aa)
UY3_18978Amine oxidase. (513 aa)
PAFAH1B1Platelet-activating factor acetylhydrolase IB subunit alpha. (399 aa)
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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