(14 nodes) Translation protein SH3-like domain superfamily network (Chelonia mydas)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UY3_11428	60S ribosomal protein L8. (257 aa)
	UY3_09446	60S ribosomal protein L26. (195 aa)
	MRPL2	39S ribosomal protein L2. (242 aa)
	RPL21	60S ribosomal protein L21. (189 aa)
	UY3_13394	60S ribosomal protein L14; Belongs to the GDA1/CD39 NTPase family. (415 aa)
	UY3_04149	Eukaryotic translation initiation factor 5A. (154 aa)
	EIF5A2	Eukaryotic translation initiation factor 5A. (153 aa)
	UY3_08590	39S ribosomal protein L2. (201 aa)
	UY3_02269	60S ribosomal protein L27. (398 aa)
	UY3_19128	Transcription elongation factor SPT5. (1243 aa)
	RPL6	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (227 aa)
	RPL27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (80 aa)
	MRPL19	39S ribosomal protein L19. (217 aa)
	UY3_11560	Putative 39S ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family. (210 aa)

Your Current Organism:

Chelonia mydas

NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIF5A2	MRPL19	M7BPJ4	M7AXL2	Eukaryotic translation initiation factor 5A.	39S ribosomal protein L19.	0.886
EIF5A2	MRPL2	M7BPJ4	M7BH61	Eukaryotic translation initiation factor 5A.	39S ribosomal protein L2.	0.741
EIF5A2	RPL21	M7BPJ4	M7BK61	Eukaryotic translation initiation factor 5A.	60S ribosomal protein L21.	0.923
EIF5A2	RPL27	M7BPJ4	M7CGG3	Eukaryotic translation initiation factor 5A.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.830
EIF5A2	RPL6	M7BPJ4	M7BYH2	Eukaryotic translation initiation factor 5A.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.874
EIF5A2	UY3_02269	M7BPJ4	M7BRK5	Eukaryotic translation initiation factor 5A.	60S ribosomal protein L27.	0.760
EIF5A2	UY3_08590	M7BPJ4	M7BQ92	Eukaryotic translation initiation factor 5A.	39S ribosomal protein L2.	0.741
EIF5A2	UY3_09446	M7BPJ4	M7BZD6	Eukaryotic translation initiation factor 5A.	60S ribosomal protein L26.	0.863
EIF5A2	UY3_11428	M7BPJ4	M7B334	Eukaryotic translation initiation factor 5A.	60S ribosomal protein L8.	0.865
EIF5A2	UY3_11560	M7BPJ4	M7B0J5	Eukaryotic translation initiation factor 5A.	Putative 39S ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.	0.815
MRPL19	EIF5A2	M7AXL2	M7BPJ4	39S ribosomal protein L19.	Eukaryotic translation initiation factor 5A.	0.886
MRPL19	MRPL2	M7AXL2	M7BH61	39S ribosomal protein L19.	39S ribosomal protein L2.	0.901
MRPL19	UY3_04149	M7AXL2	M7BN27	39S ribosomal protein L19.	Eukaryotic translation initiation factor 5A.	0.886
MRPL19	UY3_08590	M7AXL2	M7BQ92	39S ribosomal protein L19.	39S ribosomal protein L2.	0.901
MRPL19	UY3_09446	M7AXL2	M7BZD6	39S ribosomal protein L19.	60S ribosomal protein L26.	0.971
MRPL19	UY3_11428	M7AXL2	M7B334	39S ribosomal protein L19.	60S ribosomal protein L8.	0.897
MRPL19	UY3_11560	M7AXL2	M7B0J5	39S ribosomal protein L19.	Putative 39S ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.	0.978
MRPL2	EIF5A2	M7BH61	M7BPJ4	39S ribosomal protein L2.	Eukaryotic translation initiation factor 5A.	0.741
MRPL2	MRPL19	M7BH61	M7AXL2	39S ribosomal protein L2.	39S ribosomal protein L19.	0.901
MRPL2	RPL21	M7BH61	M7BK61	39S ribosomal protein L2.	60S ribosomal protein L21.	0.927