STRINGSTRING
UY3_11022 UY3_11022 UY3_08577 UY3_08577 CABIN1 CABIN1 RAD50 RAD50 UY3_09523 UY3_09523 UY3_11033 UY3_11033 UY3_10583 UY3_10583 CDKN1C CDKN1C UY3_16881 UY3_16881 CDK2 CDK2 UY3_10713 UY3_10713 UY3_06933 UY3_06933 CDKN1B CDKN1B UY3_04215 UY3_04215 UY3_03050 UY3_03050 UY3_12709 UY3_12709 UY3_02437 UY3_02437 UY3_11010 UY3_11010 UBN1 UBN1 UY3_11030 UY3_11030 UY3_00589 UY3_00589 CDK3 CDK3 UY3_18171 UY3_18171 UY3_16896 UY3_16896 UY3_16477 UY3_16477 UY3_16443 UY3_16443 UY3_16894 UY3_16894 UY3_18170 UY3_18170 CCNA1 CCNA1 CCNE2 CCNE2 UY3_15886 UY3_15886 UY3_18168 UY3_18168 UY3_12510 UY3_12510 UY3_00049 UY3_00049 UY3_01613 UY3_01613 UY3_03051 UY3_03051 PWWP2A PWWP2A UY3_00701 UY3_00701 EP400 EP400 UY3_03052 UY3_03052 UY3_04345 UY3_04345 UY3_00703 UY3_00703 NBN NBN UY3_14055 UY3_14055 UY3_13463 UY3_13463 UY3_00018 UY3_00018 UY3_11039 UY3_11039 UY3_11353 UY3_11353 UY3_00702 UY3_00702
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UY3_11022Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
UY3_08577Histone H2B; Belongs to the histone H2B family. (126 aa)
CABIN1Calcineurin-binding protein cabin-1. (280 aa)
RAD50DNA repair protein RAD50. (1312 aa)
UY3_09523Telomeric repeat-binding factor 2. (316 aa)
UY3_11033Histone H1.01. (66 aa)
UY3_10583Telomeric repeat-binding factor 1. (478 aa)
CDKN1CCyclin-dependent kinase inhibitor 1C. (215 aa)
UY3_16881Histone chaperone asf1b. (193 aa)
CDK2Cyclin-dependent kinase 2. (279 aa)
UY3_10713Calcineurin-binding protein cabin-1. (1462 aa)
UY3_06933Serine-protein kinase ATM; Belongs to the PI3/PI4-kinase family. (2408 aa)
CDKN1BCyclin-dependent kinase inhibitor 1B. (199 aa)
UY3_04215Cyclin-A2; Belongs to the cyclin family. (293 aa)
UY3_03050Histone H2B.3; Belongs to the histone H2B family. (141 aa)
UY3_12709Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
UY3_02437Protein HIRA. (1429 aa)
UY3_11010Histone H1.10. (218 aa)
UBN1Ubinuclein-1. (1136 aa)
UY3_11030Histone H1. (217 aa)
UY3_00589Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
CDK3Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily. (308 aa)
UY3_18171Histone H1.5. (178 aa)
UY3_16896Histone H2B; Belongs to the histone H2B family. (126 aa)
UY3_16477Histone chaperone ASF1. (131 aa)
UY3_16443Helicase SRCAP. (2957 aa)
UY3_16894Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (101 aa)
UY3_18170Histone H1. (111 aa)
CCNA1Cyclin-A1; Belongs to the cyclin family. (366 aa)
CCNE2G1/S-specific cyclin-E2. (334 aa)
UY3_15886Histone H1.0. (193 aa)
UY3_18168Histone H2B; Belongs to the histone H2B family. (121 aa)
UY3_12510Histone H2B 8; Belongs to the histone H2B family. (121 aa)
UY3_00049Histone H2B type 1-P; Belongs to the histone H2B family. (144 aa)
UY3_01613Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (287 aa)
UY3_03051Histone H2B.1/H2B.2; Belongs to the histone H2B family. (121 aa)
PWWP2APWWP domain-containing protein 2A. (782 aa)
UY3_00701Histone H2B 1/2. (141 aa)
EP400Uncharacterized protein. (3420 aa)
UY3_03052Histone H2B 1/2. (129 aa)
UY3_04345Cyclin-dependent kinase inhibitor 1. (202 aa)
UY3_00703Histone H2B 1.2. (141 aa)
NBNNibrin. (1008 aa)
UY3_14055Adrenocortical dysplasia protein like protein. (784 aa)
UY3_13463Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
UY3_00018Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
UY3_11039Histone H1t. (223 aa)
UY3_11353Histone chaperone ASF1A. (109 aa)
UY3_00702Histone H2B.3. (146 aa)
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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