STRINGSTRING
TAF12 TAF12 CDK2 CDK2 DYRK3 DYRK3 UY3_07061 UY3_07061 HIPK1 HIPK1 HIPK2 HIPK2 KXD1 KXD1 CDK3 CDK3 HIPK4 HIPK4 SUPT16H SUPT16H UY3_17734 UY3_17734 CCNA1 CCNA1 UY3_18494 UY3_18494 UY3_18906 UY3_18906 UY3_07023 UY3_07023 UY3_08513 UY3_08513 TAF5L TAF5L UY3_10532 UY3_10532 PRKAG1 PRKAG1 BARD1 BARD1 TBC1D20 TBC1D20 RAD50 RAD50 UY3_09899 UY3_09899 MDM2 MDM2 RECQL4 RECQL4 UY3_10443 UY3_10443 UY3_11290 UY3_11290 NUAK1 NUAK1 UY3_11445 UY3_11445 UY3_13191 UY3_13191 UY3_13309 UY3_13309 UY3_12589 UY3_12589 UY3_17824 UY3_17824 RHNO1 RHNO1 TDRD3 TDRD3 EXD2 EXD2 UY3_02272 UY3_02272 TAF1 TAF1 UY3_01589 UY3_01589 UY3_17002 UY3_17002 UY3_14734 UY3_14734 UBB UBB UY3_18795 UY3_18795 UY3_12031 UY3_12031 MDM4 MDM4 UY3_06783 UY3_06783 UY3_02729 UY3_02729 TAF11 TAF11 UY3_10371 UY3_10371 CSNK2A2 CSNK2A2 UY3_02503 UY3_02503 UY3_10152 UY3_10152 NBN NBN UY3_01679 UY3_01679 UY3_01331 UY3_01331 UY3_01613 UY3_01613 PWWP2A PWWP2A DNA2 DNA2 UY3_06517 UY3_06517 ANKRD11 ANKRD11 UY3_03022 UY3_03022 CSNK2B CSNK2B UY3_07757 UY3_07757 TAF4B TAF4B RAD9A RAD9A UY3_09219 UY3_09219 UY3_06933 UY3_06933 PRELID3B PRELID3B TP53RK TP53RK RMI1 RMI1 TAF7 TAF7 RFC3 RFC3 TOP3A TOP3A UY3_15001 UY3_15001 ANKRD12 ANKRD12 UY3_15627 UY3_15627 UY3_15034 UY3_15034 DYRK2 DYRK2 UY3_03529 UY3_03529 UY3_12848 UY3_12848 PRKAA2 PRKAA2 UY3_04215 UY3_04215 RPA1 RPA1 UY3_04406 UY3_04406
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TAF12Transcription initiation factor TFIID subunit 12. (212 aa)
CDK2Cyclin-dependent kinase 2. (279 aa)
DYRK3Dual specificity tyrosine-phosphorylation-regulated kinase 3. (575 aa)
UY3_07061Transcription initiation factor TFIID subunit 4. (965 aa)
HIPK1Homeodomain-interacting protein kinase 1. (1185 aa)
HIPK2Homeodomain-interacting protein kinase 2; Belongs to the protein kinase superfamily. (401 aa)
KXD1UPF0459 protein C19orf50 like protein. (388 aa)
CDK3Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily. (308 aa)
HIPK4Homeodomain-interacting protein kinase 4. (616 aa)
SUPT16HFACT complex subunit SPT16. (1019 aa)
UY3_17734Replication factor C subunit 4. (328 aa)
CCNA1Cyclin-A1; Belongs to the cyclin family. (366 aa)
UY3_184945'-AMP-activated protein kinase subunit beta-1. (226 aa)
UY3_18906Cyclin-dependent kinase 5. (411 aa)
UY3_07023Serine/threonine-protein kinase 6; Belongs to the protein kinase superfamily. (362 aa)
UY3_08513Checkpoint protein; Belongs to the HUS1 family. (256 aa)
TAF5LUncharacterized protein. (589 aa)
UY3_10532Mitogen-activated protein kinase. (313 aa)
PRKAG15'-AMP-activated protein kinase subunit gamma-1. (284 aa)
BARD1BRCA1-associated RING domain protein 1. (831 aa)
TBC1D20Casein kinase II subunit alpha. (732 aa)
RAD50DNA repair protein RAD50. (1312 aa)
UY3_09899Werner syndrome ATP-dependent helicase. (1551 aa)
MDM2E3 ubiquitin-protein ligase Mdm2. (191 aa)
RECQL4ATP-dependent DNA helicase Q4. (1235 aa)
UY3_10443Transcription initiation factor TFIID subunit 2. (1034 aa)
UY3_11290DNA topoisomerase 2-binding protein 1-A. (1438 aa)
NUAK1NUAK family SNF1-like kinase 1. (645 aa)
UY3_11445Ankyrin repeat domain-containing protein 31. (1388 aa)
UY3_13191Serine/threonine-protein kinase 12. (435 aa)
UY3_13309Cyclin-dependent kinase 5 activator. (313 aa)
UY3_12589Non-specific serine/threonine protein kinase. (530 aa)
UY3_17824TATA box-binding protein-like protein 2. (340 aa)
RHNO1Uncharacterized protein. (278 aa)
TDRD3Tudor domain-containing protein 3. (632 aa)
EXD2Exonuclease 3'-5' domain-containing protein 2. (657 aa)
UY3_02272Breast cancer type 1 susceptibility protein like protein. (1317 aa)
TAF1Transcription initiation factor TFIID subunit 1. (1562 aa)
UY3_01589Ankyrin repeat domain-containing protein 32. (689 aa)
UY3_17002Nucleolar complex protein 2 like protein. (837 aa)
UY3_14734Homeodomain-interacting protein kinase 3. (825 aa)
UBBPolyubiquitin-C. (154 aa)
UY3_18795Serine/threonine-protein kinase 11; Belongs to the protein kinase superfamily. (439 aa)
UY3_12031NUAK family SNF1-like kinase 2. (571 aa)
MDM4Protein Mdm4. (382 aa)
UY3_06783Bloom syndrome protein like protein. (1235 aa)
UY3_02729Transcription initiation factor TFIID subunit 9. (239 aa)
TAF11Transcription initiation factor TFIID subunit 11. (120 aa)
UY3_10371ATP-dependent DNA helicase Q4. (163 aa)
CSNK2A2Casein kinase II subunit alpha. (595 aa)
UY3_02503Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (1896 aa)
UY3_10152Replication protein A 14 kDa subunit. (180 aa)
NBNNibrin. (1008 aa)
UY3_01679Replication factor C subunit 2. (286 aa)
UY3_01331Cyclin-dependent kinase 5 activator 1. (285 aa)
UY3_01613Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (287 aa)
PWWP2APWWP domain-containing protein 2A. (782 aa)
DNA2DNA2-like helicase. (1022 aa)
UY3_06517Cell cycle checkpoint protein RAD17. (507 aa)
ANKRD11Ankyrin repeat domain-containing protein 11. (2609 aa)
UY3_03022ATR-interacting protein. (1023 aa)
CSNK2BCasein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (217 aa)
UY3_07757Cell division cycle-associated protein 7. (505 aa)
TAF4BTranscription initiation factor TFIID subunit 4B. (937 aa)
RAD9ACell cycle checkpoint control protein; Belongs to the rad9 family. (393 aa)
UY3_09219Transcription initiation factor TFIID subunit 13. (86 aa)
UY3_06933Serine-protein kinase ATM; Belongs to the PI3/PI4-kinase family. (2408 aa)
PRELID3BSerine/threonine-protein kinase 12-A. (600 aa)
TP53RKTP53-regulating kinase. (101 aa)
RMI1RecQ-mediated genome instability protein 1. (622 aa)
TAF7Transcription initiation factor TFIID subunit 7. (1014 aa)
RFC3Replication factor C subunit 3. (327 aa)
TOP3ADNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (906 aa)
UY3_15001FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (654 aa)
ANKRD12Ankyrin repeat domain-containing protein 12. (2043 aa)
UY3_15627Casein kinase II subunit alpha; Belongs to the protein kinase superfamily. (392 aa)
UY3_15034Uncharacterized protein. (73 aa)
DYRK2Dual specificity tyrosine-phosphorylation-regulated kinase 2; Belongs to the protein kinase superfamily. (438 aa)
UY3_03529Transcription initiation factor TFIID subunit 1. (535 aa)
UY3_12848Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (174 aa)
PRKAA2Non-specific serine/threonine protein kinase. (433 aa)
UY3_04215Cyclin-A2; Belongs to the cyclin family. (293 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (574 aa)
UY3_04406DNA endonuclease RBBP8. (855 aa)
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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