STRINGSTRING
UY3_08577 UY3_08577 CDK3 CDK3 UY3_18208 UY3_18208 UY3_17734 UY3_17734 RFC3 RFC3 UY3_16896 UY3_16896 UY3_16638 UY3_16638 TEN1 TEN1 RBBP7 RBBP7 NOP10 NOP10 UY3_16894 UY3_16894 ANKRD44 ANKRD44 UY3_16036 UY3_16036 CCNA1 CCNA1 UY3_17223 UY3_17223 UY3_16261 UY3_16261 UY3_16195 UY3_16195 UY3_14066 UY3_14066 UY3_18893 UY3_18893 UY3_13684 UY3_13684 UY3_13506 UY3_13506 UY3_13333 UY3_13333 UY3_13213 UY3_13213 UY3_18168 UY3_18168 RCBTB1 RCBTB1 UY3_09490 UY3_09490 UY3_10496 UY3_10496 UY3_09899 UY3_09899 UY3_11022 UY3_11022 RECQL4 RECQL4 RFC1 RFC1 UY3_00018 UY3_00018 UY3_13463 UY3_13463 UY3_12361 UY3_12361 UY3_14055 UY3_14055 UY3_12510 UY3_12510 UY3_00049 UY3_00049 UY3_00818 UY3_00818 UY3_03051 UY3_03051 UY3_00701 UY3_00701 ANKRD28 ANKRD28 UY3_05413 UY3_05413 UY3_05872 UY3_05872 DNA2 DNA2 UY3_02551 UY3_02551 CENPN CENPN UY3_03052 UY3_03052 OIP5 OIP5 UY3_00703 UY3_00703 CENPM CENPM UY3_05195 UY3_05195 UY3_01679 UY3_01679 UY3_00702 UY3_00702 UY3_00139 UY3_00139 UY3_10152 UY3_10152 UY3_10371 UY3_10371 UY3_00589 UY3_00589 UY3_06783 UY3_06783 UY3_01980 UY3_01980 DKC1 DKC1 SMARCA1 SMARCA1 EXD2 EXD2 UY3_11859 UY3_11859 UY3_04141 UY3_04141 UY3_12709 UY3_12709 UY3_03634 UY3_03634 UY3_03050 UY3_03050 UY3_03748 UY3_03748 UY3_13566 UY3_13566 UY3_04215 UY3_04215 RPA1 RPA1 POT1 POT1 CLNS1A CLNS1A UY3_14640 UY3_14640 UY3_10830 UY3_10830 RUVBL1 RUVBL1 POLD3 POLD3 CDK2 CDK2 CENPK CENPK UY3_16339 UY3_16339 UY3_09166 UY3_09166 CHTF8 CHTF8 ATRX ATRX POLA1 POLA1 UY3_10082 UY3_10082 UY3_13567 UY3_13567 DSCC1 DSCC1 UY3_09523 UY3_09523 RBBP4 RBBP4 UY3_10888 UY3_10888 UY3_10583 UY3_10583
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UY3_08577Histone H2B; Belongs to the histone H2B family. (126 aa)
CDK3Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily. (308 aa)
UY3_18208Nucleophosmin. (194 aa)
UY3_17734Replication factor C subunit 4. (328 aa)
RFC3Replication factor C subunit 3. (327 aa)
UY3_16896Histone H2B; Belongs to the histone H2B family. (126 aa)
UY3_16638Histone H2A; Belongs to the histone H2A family. (124 aa)
TEN1CST complex subunit TEN1. (127 aa)
RBBP7Histone-binding protein RBBP7. (442 aa)
NOP10H/ACA ribonucleoprotein complex subunit 3. (64 aa)
UY3_16894Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (101 aa)
ANKRD44Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B. (1008 aa)
UY3_16036Centromere protein T. (354 aa)
CCNA1Cyclin-A1; Belongs to the cyclin family. (366 aa)
UY3_17223DNA polymerase alpha catalytic subunit. (409 aa)
UY3_16261DNA polymerase delta subunit 4. (128 aa)
UY3_16195Protein CASC5. (2174 aa)
UY3_14066Protein SHQ1 like protein. (517 aa)
UY3_18893DNA ligase 1; Belongs to the ATP-dependent DNA ligase family. (1122 aa)
UY3_13684Serine/threonine-protein phosphatase 6 regulatory subunit 2. (836 aa)
UY3_13506DNA primase; Belongs to the eukaryotic-type primase small subunit family. (508 aa)
UY3_13333Replication factor C subunit 1. (221 aa)
UY3_13213Nucleoplasmin. (234 aa)
UY3_18168Histone H2B; Belongs to the histone H2B family. (121 aa)
RCBTB1RCC1 and BTB domain-containing protein 1. (537 aa)
UY3_09490Telomeric repeat-binding factor 2-interacting protein 1. (158 aa)
UY3_10496RCC1 and BTB domain-containing protein 2. (534 aa)
UY3_09899Werner syndrome ATP-dependent helicase. (1551 aa)
UY3_11022Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
RECQL4ATP-dependent DNA helicase Q4. (1235 aa)
RFC1Replication factor C subunit 1. (1038 aa)
UY3_00018Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
UY3_13463Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
UY3_12361Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (236 aa)
UY3_14055Adrenocortical dysplasia protein like protein. (784 aa)
UY3_12510Histone H2B 8; Belongs to the histone H2B family. (121 aa)
UY3_00049Histone H2B type 1-P; Belongs to the histone H2B family. (144 aa)
UY3_00818Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A. (281 aa)
UY3_03051Histone H2B.1/H2B.2; Belongs to the histone H2B family. (121 aa)
UY3_00701Histone H2B 1/2. (141 aa)
ANKRD28Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A. (931 aa)
UY3_05413Protein SHQ1 like protein. (217 aa)
UY3_05872Chromosome transmission fidelity protein 18 like protein. (891 aa)
DNA2DNA2-like helicase. (1022 aa)
UY3_02551DNA polymerase delta catalytic subunit. (320 aa)
CENPNCentromere protein N. (345 aa)
UY3_03052Histone H2B 1/2. (129 aa)
OIP5Protein Mis18-beta. (245 aa)
UY3_00703Histone H2B 1.2. (141 aa)
CENPMCentromere protein M. (177 aa)
UY3_05195CST complex subunit STN1. (340 aa)
UY3_01679Replication factor C subunit 2. (286 aa)
UY3_00702Histone H2B.3. (146 aa)
UY3_00139Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. (1276 aa)
UY3_10152Replication protein A 14 kDa subunit. (180 aa)
UY3_10371ATP-dependent DNA helicase Q4. (163 aa)
UY3_00589Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
UY3_06783Bloom syndrome protein like protein. (1235 aa)
UY3_01980Centromere protein U. (263 aa)
DKC1H/ACA ribonucleoprotein complex subunit 4. (380 aa)
SMARCA1Putative global transcription activator SNF2L1. (911 aa)
EXD2Exonuclease 3'-5' domain-containing protein 2. (657 aa)
UY3_11859Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C. (1083 aa)
UY3_04141Serine/threonine-protein phosphatase 6 regulatory subunit 3. (837 aa)
UY3_12709Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
UY3_03634H/ACA ribonucleoprotein complex subunit 4. (156 aa)
UY3_03050Histone H2B.3; Belongs to the histone H2B family. (141 aa)
UY3_03748Putative tRNA pseudouridine synthase 1. (297 aa)
UY3_13566Mis18-binding protein 1. (148 aa)
UY3_04215Cyclin-A2; Belongs to the cyclin family. (293 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (574 aa)
POT1Protection of telomeres protein 1. (650 aa)
CLNS1ARemodeling and spacing factor 1. (1528 aa)
UY3_14640SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5. (840 aa)
UY3_10830Flap endonuclease 1. (381 aa)
RUVBL1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (429 aa)
POLD3DNA polymerase delta subunit 3. (528 aa)
CDK2Cyclin-dependent kinase 2. (279 aa)
CENPKCentromere protein K. (209 aa)
UY3_16339Death domain-associated protein 6. (775 aa)
UY3_09166CST complex subunit CTC1. (777 aa)
CHTF8Chromosome transmission fidelity protein 8 like protein. (135 aa)
ATRXTranscriptional regulator ATRX. (2727 aa)
POLA1DNA polymerase alpha catalytic subunit. (957 aa)
UY3_10082Histone H2A; Belongs to the histone H2A family. (127 aa)
UY3_13567Mis18-binding protein 1. (905 aa)
DSCC1Sister chromatid cohesion protein DCC1. (357 aa)
UY3_09523Telomeric repeat-binding factor 2. (316 aa)
RBBP4Histone-binding protein RBBP4. (402 aa)
UY3_10888Centromere protein I. (658 aa)
UY3_10583Telomeric repeat-binding factor 1. (478 aa)
Your Current Organism:
Chelonia mydas
NCBI taxonomy Id: 8469
Other names: C. mydas, Chelonia midas, Chelonia mydas caranigra, Green sea turtle, Testudo mydas, green seaturtle
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