STRINGSTRING
CEP290 CEP290 TMEM67 TMEM67 TCTN1 TCTN1 TMEM17 TMEM17 MKS1 MKS1 RPGRIP1 RPGRIP1 TMEM237 TMEM237 RPGRIP1L RPGRIP1L TCTN3 TCTN3 TMEM107 TMEM107 IQCB1 IQCB1 AHI1 AHI1 TMEM216 TMEM216 CC2D2A CC2D2A NPHP4 NPHP4 B9D1 B9D1 RPGR RPGR ENSCPBP00000033691 ENSCPBP00000033691 NPHP1 NPHP1 ENSCPBP00000034063 ENSCPBP00000034063 ENSCPBP00000034064 ENSCPBP00000034064 TMEM80 TMEM80 TCTN2 TCTN2 TMEM231 TMEM231
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CEP290Centrosomal protein 290. (2381 aa)
TMEM67Transmembrane protein 67. (983 aa)
TCTN1Tectonic family member 1. (282 aa)
TMEM17Transmembrane protein 17. (221 aa)
MKS1Meckel syndrome type 1 protein. (565 aa)
RPGRIP1RPGR interacting protein 1. (1038 aa)
TMEM237Transmembrane protein 237. (399 aa)
RPGRIP1LProtein fantom. (1273 aa)
TCTN3Tectonic family member 3. (495 aa)
TMEM107Transmembrane protein 107. (140 aa)
IQCB1IQ calmodulin-binding motif-containing protein 1. (596 aa)
AHI1Abelson helper integration site 1. (1251 aa)
TMEM216Transmembrane protein 216. (255 aa)
CC2D2ACoiled-coil and C2 domain-containing protein 2A. (1621 aa)
NPHP4Nephrocystin 4. (1453 aa)
B9D1B9 domain-containing protein 1. (209 aa)
RPGRX-linked retinitis pigmentosa GTPase regulator. (1099 aa)
ENSCPBP00000033691Meckelin-like. (586 aa)
NPHP1Nephrocystin 1. (702 aa)
ENSCPBP00000034063Coiled-coil and C2 domain-containing protein 2A-like. (139 aa)
ENSCPBP00000034064annotation not available (92 aa)
TMEM80Transmembrane protein 80. (220 aa)
TCTN2Tectonic family member 2. (653 aa)
TMEM231Transmembrane protein 231. (264 aa)
Your Current Organism:
Chrysemys picta
NCBI taxonomy Id: 8478
Other names: C. picta bellii, Chrysemys picta bellii, Chrysemys picta subsp. bellii, western painted turtle
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.