5 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EMC1	ER membrane protein complex subunit 1. (1009 aa)
	EMC4	ER membrane protein complex subunit 4; Belongs to the EMC4 family. (183 aa)
	EMC3	ER membrane protein complex subunit 3; Belongs to the EMC3 family. (302 aa)
	EMC2	ER membrane protein complex subunit 2. (297 aa)
	EMC6	ER membrane protein complex subunit 6. (111 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EMC1	EMC2	A0A151MJ46	A0A151MXM4	ER membrane protein complex subunit 1.	ER membrane protein complex subunit 2.	0.992
EMC1	EMC3	A0A151MJ46	A0A151MTH6	ER membrane protein complex subunit 1.	ER membrane protein complex subunit 3; Belongs to the EMC3 family.	0.989
EMC1	EMC4	A0A151MJ46	A0A151MJU2	ER membrane protein complex subunit 1.	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	0.989
EMC1	EMC6	A0A151MJ46	A0A151NMS4	ER membrane protein complex subunit 1.	ER membrane protein complex subunit 6.	0.969
EMC2	EMC1	A0A151MXM4	A0A151MJ46	ER membrane protein complex subunit 2.	ER membrane protein complex subunit 1.	0.992
EMC2	EMC3	A0A151MXM4	A0A151MTH6	ER membrane protein complex subunit 2.	ER membrane protein complex subunit 3; Belongs to the EMC3 family.	0.991
EMC2	EMC4	A0A151MXM4	A0A151MJU2	ER membrane protein complex subunit 2.	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	0.990
EMC2	EMC6	A0A151MXM4	A0A151NMS4	ER membrane protein complex subunit 2.	ER membrane protein complex subunit 6.	0.993
EMC3	EMC1	A0A151MTH6	A0A151MJ46	ER membrane protein complex subunit 3; Belongs to the EMC3 family.	ER membrane protein complex subunit 1.	0.989
EMC3	EMC2	A0A151MTH6	A0A151MXM4	ER membrane protein complex subunit 3; Belongs to the EMC3 family.	ER membrane protein complex subunit 2.	0.991
EMC3	EMC4	A0A151MTH6	A0A151MJU2	ER membrane protein complex subunit 3; Belongs to the EMC3 family.	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	0.992
EMC3	EMC6	A0A151MTH6	A0A151NMS4	ER membrane protein complex subunit 3; Belongs to the EMC3 family.	ER membrane protein complex subunit 6.	0.985
EMC4	EMC1	A0A151MJU2	A0A151MJ46	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	ER membrane protein complex subunit 1.	0.989
EMC4	EMC2	A0A151MJU2	A0A151MXM4	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	ER membrane protein complex subunit 2.	0.990
EMC4	EMC3	A0A151MJU2	A0A151MTH6	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	ER membrane protein complex subunit 3; Belongs to the EMC3 family.	0.992
EMC4	EMC6	A0A151MJU2	A0A151NMS4	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	ER membrane protein complex subunit 6.	0.966
EMC6	EMC1	A0A151NMS4	A0A151MJ46	ER membrane protein complex subunit 6.	ER membrane protein complex subunit 1.	0.969
EMC6	EMC2	A0A151NMS4	A0A151MXM4	ER membrane protein complex subunit 6.	ER membrane protein complex subunit 2.	0.993
EMC6	EMC3	A0A151NMS4	A0A151MTH6	ER membrane protein complex subunit 6.	ER membrane protein complex subunit 3; Belongs to the EMC3 family.	0.985
EMC6	EMC4	A0A151NMS4	A0A151MJU2	ER membrane protein complex subunit 6.	ER membrane protein complex subunit 4; Belongs to the EMC4 family.	0.966