38 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	UFC1	Ubiquitin-fold modifier-conjugating enzyme 1; E2-like enzyme which forms an intermediate with UFM1 via a thioester linkage. (164 aa)
	TRIM40	Zinc finger protein RFP-like. (410 aa)
	AAED1	Thioredoxin-like protein AAED1 isoform A. (244 aa)
	ZNF367	Zinc finger protein 367. (337 aa)
	SKOR1	SKI family transcriptional corepressor 1. (132 aa)
	CCDC34	Coiled-coil domain-containing protein 34. (209 aa)
	GSTCD	Glutathione S-transferase C-terminal domain-containing protein. (628 aa)
	CUNH3orf14	Uncharacterized protein. (163 aa)
	RPS6KL1	Ribosomal protein S6 kinase-like 1. (678 aa)
	TOX3-1	TOX high mobility group box family member 3 isoform A. (476 aa)
	SKOR2	SKI family transcriptional corepressor 2. (163 aa)
	CUNH18orf54	Lung adenoma susceptibility protein 2. (544 aa)
	DEPDC1B	DEP domain-containing protein 1B. (529 aa)
	PTPRA-2	Uncharacterized protein. (1013 aa)
	UBOX5	RING finger protein 37. (561 aa)
	DDRGK1	DDRGK domain-containing protein 1. (297 aa)
	FASTKD5	FAST kinase domain-containing protein 5 isoform B. (758 aa)
	LZTS3	Leucine zipper putative tumor suppressor 3. (663 aa)
	UBALD2	UBA-like domain-containing protein 2. (93 aa)
	CCDC43	Coiled-coil domain-containing protein 43. (218 aa)
	CCDC150	Coiled-coil domain-containing protein 150 isoform A. (974 aa)
	NEMP2	Nuclear envelope integral membrane protein 2. (426 aa)
	Y1Q_0008788	DNA-binding protein SATB. (876 aa)
	RNF122	RING finger protein 122. (155 aa)
	UFM1	Ubiquitin-fold modifier 1. (149 aa)
	UBALD1	UBA-like domain-containing protein 1. (168 aa)
	CCDC77	Coiled-coil domain-containing protein 77 isoform B. (497 aa)
	DEPDC1-1	DEP domain-containing protein 1A isoform B. (606 aa)
	RTKN	Rhotekin isoform A. (560 aa)
	TDRD10	Tudor domain-containing protein 10 isoform B. (430 aa)
	UFL1	E3 UFM1-protein ligase 1. (793 aa)
	ZNF366	Zinc finger protein 366. (663 aa)
	UBA5	Ubiquitin-like modifier-activating enzyme 5. (402 aa)
	BTBD9	BTB/POZ domain-containing protein 9. (647 aa)
	CDK5RAP3	CDK5 regulatory subunit-associated protein 3. (534 aa)
	SMYD1	Histone-lysine N-methyltransferase SMYD1 isoform B. (486 aa)
	UFSP2	Ufm1-specific protease 2. (482 aa)
	ZNF366-2	Uncharacterized protein. (764 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAED1	RNF122	A0A151M847	A0A151NBI8	Thioredoxin-like protein AAED1 isoform A.	RING finger protein 122.	0.664
AAED1	SMYD1	A0A151M847	A0A151P984	Thioredoxin-like protein AAED1 isoform A.	Histone-lysine N-methyltransferase SMYD1 isoform B.	0.664
AAED1	UBOX5	A0A151M847	A0A151MYA2	Thioredoxin-like protein AAED1 isoform A.	RING finger protein 37.	0.666
AAED1	ZNF367	A0A151M847	A0A151M876	Thioredoxin-like protein AAED1 isoform A.	Zinc finger protein 367.	0.682
BTBD9	SKOR1	A0A151P309	A0A151M8U3	BTB/POZ domain-containing protein 9.	SKI family transcriptional corepressor 1.	0.615
BTBD9	TOX3-1	A0A151P309	A0A151MS12	BTB/POZ domain-containing protein 9.	TOX high mobility group box family member 3 isoform A.	0.581
BTBD9	ZNF366-2	A0A151P309	A0A151PHN5	BTB/POZ domain-containing protein 9.	Uncharacterized protein.	0.503
CCDC150	CCDC34	A0A151N9Z9	A0A151MBP6	Coiled-coil domain-containing protein 150 isoform A.	Coiled-coil domain-containing protein 34.	0.571
CCDC150	CCDC77	A0A151N9Z9	A0A151NIE8	Coiled-coil domain-containing protein 150 isoform A.	Coiled-coil domain-containing protein 77 isoform B.	0.577
CCDC150	CUNH18orf54	A0A151N9Z9	A0A151MWT4	Coiled-coil domain-containing protein 150 isoform A.	Lung adenoma susceptibility protein 2.	0.435
CCDC150	CUNH3orf14	A0A151N9Z9	A0A151MKH5	Coiled-coil domain-containing protein 150 isoform A.	Uncharacterized protein.	0.587
CCDC150	DEPDC1B	A0A151N9Z9	A0A151MXG5	Coiled-coil domain-containing protein 150 isoform A.	DEP domain-containing protein 1B.	0.570
CCDC150	GSTCD	A0A151N9Z9	A0A151MJ93	Coiled-coil domain-containing protein 150 isoform A.	Glutathione S-transferase C-terminal domain-containing protein.	0.570
CCDC150	NEMP2	A0A151N9Z9	A0A151NA46	Coiled-coil domain-containing protein 150 isoform A.	Nuclear envelope integral membrane protein 2.	0.586
CCDC150	ZNF367	A0A151N9Z9	A0A151M876	Coiled-coil domain-containing protein 150 isoform A.	Zinc finger protein 367.	0.541
CCDC34	CCDC150	A0A151MBP6	A0A151N9Z9	Coiled-coil domain-containing protein 34.	Coiled-coil domain-containing protein 150 isoform A.	0.571
CCDC34	CCDC77	A0A151MBP6	A0A151NIE8	Coiled-coil domain-containing protein 34.	Coiled-coil domain-containing protein 77 isoform B.	0.562
CCDC34	DEPDC1B	A0A151MBP6	A0A151MXG5	Coiled-coil domain-containing protein 34.	DEP domain-containing protein 1B.	0.570
CCDC34	GSTCD	A0A151MBP6	A0A151MJ93	Coiled-coil domain-containing protein 34.	Glutathione S-transferase C-terminal domain-containing protein.	0.567
CCDC34	NEMP2	A0A151MBP6	A0A151NA46	Coiled-coil domain-containing protein 34.	Nuclear envelope integral membrane protein 2.	0.570