STRINGSTRING
CERS6 CERS6 SGMS2 SGMS2 DEGS2 DEGS2 SMPD4 SMPD4 SMPD2 SMPD2 UGCG UGCG CERK CERK ACER1 ACER1 ASAH2 ASAH2 SMPD1 SMPD1 ASAH1 ASAH1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CERS6Ceramide synthase 6. (411 aa)
SGMS2Phosphatidylcholine:ceramide cholinephosphotransferase 2. (365 aa)
DEGS2Sphingolipid delta(4)-desaturase/C4-monooxygenase DES2. (322 aa)
SMPD4Sphingomyelin phosphodiesterase 4 isoform A. (829 aa)
SMPD2Sphingomyelin phosphodiesterase 2. (409 aa)
UGCGCeramide glucosyltransferase. (394 aa)
CERKCeramide kinase isoform B. (523 aa)
ACER1Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (318 aa)
ASAH2Neutral ceramidase. (1169 aa)
SMPD1Sphingomyelin phosphodiesterase. (287 aa)
ASAH1Acid ceramidase; Belongs to the acid ceramidase family. (395 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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