STRINGSTRING
RRP7A RRP7A UTP20 UTP20 NOL6 NOL6 HEATR1 HEATR1 RTCA RTCA DNTTIP2 DNTTIP2 GLMN GLMN RCL1 RCL1 MPHOSPH10 MPHOSPH10 NAT10 NAT10 EMG1 EMG1 RRP9 RRP9 BMS1 BMS1 BMS1L BMS1L WDR3 WDR3 DCAF13 DCAF13 TBL3 TBL3 IMP4 IMP4 NOL11 NOL11 COPRS COPRS UTP18 UTP18 UTP3-1 UTP3-1 AATF AATF WDR46 WDR46 NOL10 NOL10 NOP58 NOP58 WDR75 WDR75 IMP3 IMP3 FBL FBL UTP11L UTP11L SNU13 SNU13 FCF1 FCF1 NGDN NGDN PWP2 PWP2 NOC4L NOC4L DHX37 DHX37 PDCD11 PDCD11 UTP4 UTP4 NOP56 NOP56 WDR43 WDR43 GCC1 GCC1 UTP14A UTP14A NOP14 NOP14 KRR1 KRR1 WDR36 WDR36 UTP15 UTP15 MCC MCC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RRP7ARibosomal RNA-processing 7-like protein A. (277 aa)
UTP20Small subunit processome component 20-like protein. (2809 aa)
NOL6Nucleolar protein 6. (1172 aa)
HEATR1HEAT repeat-containing protein 1. (2052 aa)
RTCARNA 3'-terminal phosphate cyclase. (365 aa)
DNTTIP2Deoxynucleotidyltransferase terminal-interacting protein 2. (572 aa)
GLMNGlomulin isoform A. (643 aa)
RCL1RNA 3'-terminal phosphate cyclase-like protein. (372 aa)
MPHOSPH10U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family. (670 aa)
NAT10RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. (1748 aa)
EMG1Ribosomal RNA small subunit methyltransferase NEP1. (226 aa)
RRP9U3 small nucleolar RNA-interacting protein 2 isoform B. (487 aa)
BMS1Ribosome biogenesis BMS1-like protein. (879 aa)
BMS1LRibosome biogenesis BMS1-like protein. (399 aa)
WDR3WD repeat-containing protein 3. (941 aa)
DCAF13DDB1-and CUL4-associated factor 13. (445 aa)
TBL3Transducin beta-like protein 3. (811 aa)
IMP4U3 small nucleolar ribonucleoprotein IMP4. (291 aa)
NOL11Nucleolar protein 11. (723 aa)
COPRSUncharacterized protein. (831 aa)
UTP18U3 small nucleolar RNA-associated 18-like protein. (502 aa)
UTP3-1Something about silencing protein 10 isoform A. (478 aa)
AATFProtein AATF. (571 aa)
WDR46WD repeat-containing protein 46. (640 aa)
NOL10Nucleolar protein 10. (651 aa)
NOP58Nucleolar protein 58. (515 aa)
WDR75WD repeat-containing protein 75. (834 aa)
IMP3U3 small nucleolar ribonucleoprotein IMP3. (187 aa)
FBLrRNA 2'-O-methyltransferase fibrillarin. (295 aa)
UTP11LU3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (253 aa)
SNU13Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (111 aa)
FCF1rRNA-processing FCF1-like protein. (198 aa)
NGDNNeuroguidin. (331 aa)
PWP2Periodic tryptophan 2-like protein. (910 aa)
NOC4LNucleolar complex 4-like protein isoform B. (554 aa)
DHX37Putative ATP-dependent RNA helicase DHX37. (1148 aa)
PDCD11RRP5-like protein. (1825 aa)
UTP4Cirhin. (683 aa)
NOP56Nucleolar protein 56. (541 aa)
WDR43WD repeat-containing protein 43 isoform A. (595 aa)
GCC1GRIP and coiled-coil domain-containing protein 1. (688 aa)
UTP14AU3 small nucleolar RNA-associated 14-like protein A. (742 aa)
NOP14Nucleolar protein 14. (841 aa)
KRR1KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (379 aa)
WDR36WD repeat-containing protein 36. (898 aa)
UTP15U3 small nucleolar RNA-associated 15-like protein. (519 aa)
MCCColorectal mutant cancer protein isoform A. (979 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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