(23 nodes) Mixed, incl. Inner dynein arm assembly, and Dynein regulatory complex protein network (Alligator mississippiensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CCDC39	Coiled-coil domain-containing protein 39. (955 aa)
	DYX1C1	Dyslexia susceptibility 1 candidate 1 protein. (369 aa)
	GAS8	Growth arrest-specific protein 8. (458 aa)
	CUNH21orf59	Uncharacterized protein. (290 aa)
	ZMYND10	Zinc finger MYND domain-containing protein 10 isoform A. (454 aa)
	RSPH9	Radial spoke head 9-like protein. (325 aa)
	DNAAF1-1	Dynein assembly factor 1, axonemal. (755 aa)
	SPAG1	Sperm-associated antigen 1. (959 aa)
	DNAAF5	Dynein assembly factor 5, axonemal isoform A. (742 aa)
	CCDC65	Coiled-coil domain-containing protein 65. (232 aa)
	PIH1D2	PIH1 domain-containing protein 2. (240 aa)
	DNALI1	Axonemal dynein light intermediate polypeptide 1. (257 aa)
	CCDC65L	Coiled-coil domain-containing protein 65. (188 aa)
	CCDC40	Coiled-coil domain-containing protein 40. (1131 aa)
	RTN4L	Reticulon-4. (584 aa)
	PIH1D3	Protein PIH1D3. (197 aa)
	RSPH1	Radial spoke head 1-like protein. (327 aa)
	DNAI2	Dynein intermediate chain 2, axonemal. (625 aa)
	Y1Q_0023028	Uncharacterized protein. (262 aa)
	LRRC6	TilB-like protein. (475 aa)
	CCDC103	Coiled-coil domain-containing protein 103 isoform B. (288 aa)
	DNAAF2	Protein kintoun. (351 aa)
	DRC1	Dynein regulatory complex protein 1. (728 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCDC103	CCDC39	A0A151PC70	A0A151M6A4	Coiled-coil domain-containing protein 103 isoform B.	Coiled-coil domain-containing protein 39.	0.572
CCDC103	CCDC40	A0A151PC70	A0A151NKJ4	Coiled-coil domain-containing protein 103 isoform B.	Coiled-coil domain-containing protein 40.	0.561
CCDC103	CCDC65	A0A151PC70	A0A151NDH8	Coiled-coil domain-containing protein 103 isoform B.	Coiled-coil domain-containing protein 65.	0.572
CCDC103	CCDC65L	A0A151PC70	A0A151NGQ3	Coiled-coil domain-containing protein 103 isoform B.	Coiled-coil domain-containing protein 65.	0.572
CCDC103	CUNH21orf59	A0A151PC70	A0A151MEF1	Coiled-coil domain-containing protein 103 isoform B.	Uncharacterized protein.	0.436
CCDC103	DNAAF1-1	A0A151PC70	A0A151MLK1	Coiled-coil domain-containing protein 103 isoform B.	Dynein assembly factor 1, axonemal.	0.571
CCDC103	DNAAF5	A0A151PC70	A0A151N1N6	Coiled-coil domain-containing protein 103 isoform B.	Dynein assembly factor 5, axonemal isoform A.	0.549
CCDC103	DNAI2	A0A151PC70	A0A151NVX0	Coiled-coil domain-containing protein 103 isoform B.	Dynein intermediate chain 2, axonemal.	0.589
CCDC103	DRC1	A0A151PC70	A0A151PHC6	Coiled-coil domain-containing protein 103 isoform B.	Dynein regulatory complex protein 1.	0.633
CCDC103	DYX1C1	A0A151PC70	A0A151M9T8	Coiled-coil domain-containing protein 103 isoform B.	Dyslexia susceptibility 1 candidate 1 protein.	0.542
CCDC103	LRRC6	A0A151PC70	A0A151P823	Coiled-coil domain-containing protein 103 isoform B.	TilB-like protein.	0.587
CCDC103	PIH1D3	A0A151PC70	A0A151NNA5	Coiled-coil domain-containing protein 103 isoform B.	Protein PIH1D3.	0.469
CCDC103	RSPH1	A0A151PC70	A0A151NQS8	Coiled-coil domain-containing protein 103 isoform B.	Radial spoke head 1-like protein.	0.578
CCDC103	RSPH9	A0A151PC70	A0A151MHD5	Coiled-coil domain-containing protein 103 isoform B.	Radial spoke head 9-like protein.	0.552
CCDC103	RTN4L	A0A151PC70	A0A151NMA4	Coiled-coil domain-containing protein 103 isoform B.	Reticulon-4.	0.560
CCDC103	SPAG1	A0A151PC70	A0A151MXY0	Coiled-coil domain-containing protein 103 isoform B.	Sperm-associated antigen 1.	0.562
CCDC103	Y1Q_0023028	A0A151PC70	A0A151P7H1	Coiled-coil domain-containing protein 103 isoform B.	Uncharacterized protein.	0.416
CCDC103	ZMYND10	A0A151PC70	A0A151MEK3	Coiled-coil domain-containing protein 103 isoform B.	Zinc finger MYND domain-containing protein 10 isoform A.	0.582
CCDC39	CCDC103	A0A151M6A4	A0A151PC70	Coiled-coil domain-containing protein 39.	Coiled-coil domain-containing protein 103 isoform B.	0.572
CCDC39	CCDC40	A0A151M6A4	A0A151NKJ4	Coiled-coil domain-containing protein 39.	Coiled-coil domain-containing protein 40.	0.848