(11 nodes) Inner dynein arm assembly, and Radial spokehead-like protein network (Alligator mississippiensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CCDC39	Coiled-coil domain-containing protein 39. (955 aa)
	GAS8	Growth arrest-specific protein 8. (458 aa)
	ZMYND10	Zinc finger MYND domain-containing protein 10 isoform A. (454 aa)
	RSPH9	Radial spoke head 9-like protein. (325 aa)
	DNAAF1-1	Dynein assembly factor 1, axonemal. (755 aa)
	DNALI1	Axonemal dynein light intermediate polypeptide 1. (257 aa)
	CCDC40	Coiled-coil domain-containing protein 40. (1131 aa)
	RTN4L	Reticulon-4. (584 aa)
	RSPH1	Radial spoke head 1-like protein. (327 aa)
	DNAI2	Dynein intermediate chain 2, axonemal. (625 aa)
	LRRC6	TilB-like protein. (475 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCDC39	CCDC40	A0A151M6A4	A0A151NKJ4	Coiled-coil domain-containing protein 39.	Coiled-coil domain-containing protein 40.	0.848
CCDC39	DNAAF1-1	A0A151M6A4	A0A151MLK1	Coiled-coil domain-containing protein 39.	Dynein assembly factor 1, axonemal.	0.641
CCDC39	DNAI2	A0A151M6A4	A0A151NVX0	Coiled-coil domain-containing protein 39.	Dynein intermediate chain 2, axonemal.	0.584
CCDC39	DNALI1	A0A151M6A4	A0A151NG17	Coiled-coil domain-containing protein 39.	Axonemal dynein light intermediate polypeptide 1.	0.646
CCDC39	GAS8	A0A151M6A4	A0A151MCI2	Coiled-coil domain-containing protein 39.	Growth arrest-specific protein 8.	0.465
CCDC39	LRRC6	A0A151M6A4	A0A151P823	Coiled-coil domain-containing protein 39.	TilB-like protein.	0.700
CCDC39	RSPH1	A0A151M6A4	A0A151NQS8	Coiled-coil domain-containing protein 39.	Radial spoke head 1-like protein.	0.526
CCDC39	RSPH9	A0A151M6A4	A0A151MHD5	Coiled-coil domain-containing protein 39.	Radial spoke head 9-like protein.	0.593
CCDC39	RTN4L	A0A151M6A4	A0A151NMA4	Coiled-coil domain-containing protein 39.	Reticulon-4.	0.634
CCDC39	ZMYND10	A0A151M6A4	A0A151MEK3	Coiled-coil domain-containing protein 39.	Zinc finger MYND domain-containing protein 10 isoform A.	0.572
CCDC40	CCDC39	A0A151NKJ4	A0A151M6A4	Coiled-coil domain-containing protein 40.	Coiled-coil domain-containing protein 39.	0.848
CCDC40	DNAAF1-1	A0A151NKJ4	A0A151MLK1	Coiled-coil domain-containing protein 40.	Dynein assembly factor 1, axonemal.	0.669
CCDC40	DNAI2	A0A151NKJ4	A0A151NVX0	Coiled-coil domain-containing protein 40.	Dynein intermediate chain 2, axonemal.	0.551
CCDC40	DNALI1	A0A151NKJ4	A0A151NG17	Coiled-coil domain-containing protein 40.	Axonemal dynein light intermediate polypeptide 1.	0.645
CCDC40	GAS8	A0A151NKJ4	A0A151MCI2	Coiled-coil domain-containing protein 40.	Growth arrest-specific protein 8.	0.426
CCDC40	LRRC6	A0A151NKJ4	A0A151P823	Coiled-coil domain-containing protein 40.	TilB-like protein.	0.677
CCDC40	RSPH1	A0A151NKJ4	A0A151NQS8	Coiled-coil domain-containing protein 40.	Radial spoke head 1-like protein.	0.542
CCDC40	RSPH9	A0A151NKJ4	A0A151MHD5	Coiled-coil domain-containing protein 40.	Radial spoke head 9-like protein.	0.552
CCDC40	RTN4L	A0A151NKJ4	A0A151NMA4	Coiled-coil domain-containing protein 40.	Reticulon-4.	0.614
CCDC40	ZMYND10	A0A151NKJ4	A0A151MEK3	Coiled-coil domain-containing protein 40.	Zinc finger MYND domain-containing protein 10 isoform A.	0.541