15 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ADRA2B	Alpha-2B adrenergic receptor. (508 aa)
	ADRA1B	Uncharacterized protein. (203 aa)
	ADRB2	Beta-2 adrenergic receptor. (392 aa)
	Y1Q_0011868	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction. (125 aa)
	HTR6	5-hydroxytryptamine receptor 6; Belongs to the G-protein coupled receptor 1 family. (436 aa)
	ADORA2A	Adenosine receptor A2; Receptor for adenosine. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Belongs to the G-protein coupled receptor 1 family. (436 aa)
	ADCY9	Adenylate cyclase type 9 isoform B; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family. (993 aa)
	ADORA2B	Adenosine receptor A2b. (107 aa)
	GNAL-2	Uncharacterized protein. (384 aa)
	Y1Q_0015615	Uncharacterized protein. (89 aa)
	ADRA2A	Alpha-2A adrenergic receptor. (435 aa)
	GNAL	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform A. (412 aa)
	PTRHD1	Putative peptidyl-tRNA hydrolase PTRHD1. (119 aa)
	Y1Q_0014655	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling. (1059 aa)
	DRD5-2	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (388 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADCY9	ADRA2A	A0A151N6G1	A0A151NUN6	Adenylate cyclase type 9 isoform B; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Alpha-2A adrenergic receptor.	0.451
ADCY9	ADRA2B	A0A151N6G1	A0A151LY50	Adenylate cyclase type 9 isoform B; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Alpha-2B adrenergic receptor.	0.552
ADCY9	ADRB2	A0A151N6G1	A0A151M6P8	Adenylate cyclase type 9 isoform B; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Beta-2 adrenergic receptor.	0.426
ADCY9	GNAL	A0A151N6G1	A0A151NZ11	Adenylate cyclase type 9 isoform B; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform A.	0.931
ADCY9	GNAL-2	A0A151N6G1	A0A151NEU2	Adenylate cyclase type 9 isoform B; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Uncharacterized protein.	0.931
ADCY9	PTRHD1	A0A151N6G1	A0A151P1V8	Adenylate cyclase type 9 isoform B; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Putative peptidyl-tRNA hydrolase PTRHD1.	0.597
ADCY9	Y1Q_0011868	A0A151N6G1	A0A151MHW5	Adenylate cyclase type 9 isoform B; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.653
ADCY9	Y1Q_0014655	A0A151N6G1	A0A151P8F6	Adenylate cyclase type 9 isoform B; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Adenylate cyclase; Catalyzes the formation of the signaling molecule cAMP in response to G-protein signaling.	0.667
ADCY9	Y1Q_0015615	A0A151N6G1	A0A151NNY7	Adenylate cyclase type 9 isoform B; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.	Uncharacterized protein.	0.543
ADORA2A	ADORA2B	A0A151N4M6	A0A151NB06	Adenosine receptor A2; Receptor for adenosine. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Belongs to the G-protein coupled receptor 1 family.	Adenosine receptor A2b.	0.900
ADORA2A	GNAL	A0A151N4M6	A0A151NZ11	Adenosine receptor A2; Receptor for adenosine. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform A.	0.548
ADORA2A	GNAL-2	A0A151N4M6	A0A151NEU2	Adenosine receptor A2; Receptor for adenosine. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.952
ADORA2B	ADORA2A	A0A151NB06	A0A151N4M6	Adenosine receptor A2b.	Adenosine receptor A2; Receptor for adenosine. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Belongs to the G-protein coupled receptor 1 family.	0.900
ADORA2B	GNAL	A0A151NB06	A0A151NZ11	Adenosine receptor A2b.	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform A.	0.548
ADORA2B	GNAL-2	A0A151NB06	A0A151NEU2	Adenosine receptor A2b.	Uncharacterized protein.	0.952
ADRA1B	ADRA2B	A0A151M6I4	A0A151LY50	Uncharacterized protein.	Alpha-2B adrenergic receptor.	0.663
ADRA1B	ADRB2	A0A151M6I4	A0A151M6P8	Uncharacterized protein.	Beta-2 adrenergic receptor.	0.587
ADRA1B	DRD5-2	A0A151M6I4	A0A151PA13	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.485
ADRA1B	GNAL	A0A151M6I4	A0A151NZ11	Uncharacterized protein.	Guanine nucleotide-binding protein G(Olf) subunit alpha isoform A.	0.518
ADRA1B	GNAL-2	A0A151M6I4	A0A151NEU2	Uncharacterized protein.	Uncharacterized protein.	0.518