(19 nodes) piRNA metabolic process, and piRNA binding network (Alligator mississippiensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	HENMT1	Small RNA 2'-O-methyltransferase. (389 aa)
	TDRKH	Tudor and KH domain-containing protein. (626 aa)
	TDRD5	Tudor domain-containing protein 5 isoform B. (954 aa)
	MOV10	Putative helicase MOV-10. (992 aa)
	EXD1	Exonuclease 3'-5' domain-containing protein 1 isoform B. (405 aa)
	PLD6	Mitochondrial cardiolipin hydrolase. (127 aa)
	TDRD12	Putative ATP-dependent RNA helicase TDRD12 isoform B. (1241 aa)
	FKBP6	Peptidylprolyl isomerase. (310 aa)
	TDRD6	Tudor domain-containing protein 6. (2039 aa)
	SLC39A14	Zinc transporter ZIP14. (1452 aa)
	TDRD7	Tudor domain-containing protein 7 isoform B. (1114 aa)
	PIWIL1-2	Uncharacterized protein; Belongs to the argonaute family. (912 aa)
	TDRD1	Tudor domain-containing protein 1. (1090 aa)
	PIWIL1	Piwi-like protein 1; Belongs to the argonaute family. (849 aa)
	TDRD9	Putative ATP-dependent RNA helicase TDRD9. (1375 aa)
	MOV10L1	Putative helicase Mov10l1 isoform A. (1203 aa)
	ASZ1	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1. (468 aa)
	TDRD15	Tudor domain-containing protein 15. (317 aa)
	Y1Q_0020236	Uncharacterized protein. (166 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASZ1	EXD1	A0A151PF13	A0A151MV39	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Exonuclease 3'-5' domain-containing protein 1 isoform B.	0.418
ASZ1	FKBP6	A0A151PF13	A0A151N8X0	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Peptidylprolyl isomerase.	0.704
ASZ1	HENMT1	A0A151PF13	A0A151M3Z7	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Small RNA 2'-O-methyltransferase.	0.587
ASZ1	MOV10	A0A151PF13	A0A151MTM9	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Putative helicase MOV-10.	0.665
ASZ1	MOV10L1	A0A151PF13	A0A151PEY9	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Putative helicase Mov10l1 isoform A.	0.665
ASZ1	PIWIL1	A0A151PF13	A0A151P1R4	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Piwi-like protein 1; Belongs to the argonaute family.	0.505
ASZ1	PIWIL1-2	A0A151PF13	A0A151NS62	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Uncharacterized protein; Belongs to the argonaute family.	0.505
ASZ1	PLD6	A0A151PF13	A0A151N1Z5	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Mitochondrial cardiolipin hydrolase.	0.703
ASZ1	SLC39A14	A0A151PF13	A0A151NBM9	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Zinc transporter ZIP14.	0.749
ASZ1	TDRD1	A0A151PF13	A0A151NUX6	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Tudor domain-containing protein 1.	0.482
ASZ1	TDRD12	A0A151PF13	A0A151N7L8	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Putative ATP-dependent RNA helicase TDRD12 isoform B.	0.639
ASZ1	TDRD15	A0A151PF13	A0A151PIL1	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Tudor domain-containing protein 15.	0.482
ASZ1	TDRD5	A0A151PF13	A0A151MID2	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Tudor domain-containing protein 5 isoform B.	0.513
ASZ1	TDRD6	A0A151PF13	A0A151NBC5	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Tudor domain-containing protein 6.	0.482
ASZ1	TDRD7	A0A151PF13	A0A151NE04	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Tudor domain-containing protein 7 isoform B.	0.448
ASZ1	TDRD9	A0A151PF13	A0A151P8F8	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Putative ATP-dependent RNA helicase TDRD9.	0.662
ASZ1	TDRKH	A0A151PF13	A0A151M5B1	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Tudor and KH domain-containing protein.	0.603
ASZ1	Y1Q_0020236	A0A151PF13	A0A151PIN4	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	Uncharacterized protein.	0.482
EXD1	ASZ1	A0A151MV39	A0A151PF13	Exonuclease 3'-5' domain-containing protein 1 isoform B.	Ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1.	0.418
EXD1	FKBP6	A0A151MV39	A0A151N8X0	Exonuclease 3'-5' domain-containing protein 1 isoform B.	Peptidylprolyl isomerase.	0.713