28 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL37A	60S ribosomal protein L37a. (92 aa)
	RPS19	40S ribosomal protein S19. (515 aa)
	RPL26L1	60S ribosomal protein L26-like 1. (116 aa)
	RPL4	60S ribosomal protein L4. (363 aa)
	RPL24	60S ribosomal protein L24. (157 aa)
	RPL12	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family. (147 aa)
	RPL7A	60S ribosomal protein L7a. (266 aa)
	RPL18	60S ribosomal protein L18. (188 aa)
	RPL28	60S ribosomal protein L28. (153 aa)
	RPL34	60S ribosomal protein L34. (117 aa)
	RPL15	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (186 aa)
	RPL14	60S ribosomal protein L14. (139 aa)
	RPL21	60S ribosomal protein L21. (147 aa)
	RPL23A	60S ribosomal protein L23a. (144 aa)
	RPL37	Ribosomal protein L37; Binds to the 23S rRNA. (97 aa)
	RPL30	60S ribosomal protein L30. (175 aa)
	RPL35	60S ribosomal protein L35. (123 aa)
	RPL29	60S ribosomal protein L29. (260 aa)
	RPL36A	60S ribosomal protein L36a isoform B; Belongs to the eukaryotic ribosomal protein eL42 family. (150 aa)
	RPL8	60S ribosomal protein L8. (267 aa)
	RPL6	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (257 aa)
	RPL38	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family. (70 aa)
	RPL31	60S ribosomal protein L31. (180 aa)
	RPL23	60S ribosomal protein L23 isoform A; Belongs to the universal ribosomal protein uL14 family. (140 aa)
	RPS4X	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (280 aa)
	RPL9	60S ribosomal protein L9. (143 aa)
	RPL27	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (170 aa)
	RPL18A	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (176 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RPL12	RPL14	A0A151MEY3	A0A151MR19	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L14.	0.999
RPL12	RPL15	A0A151MEY3	A0A151MQV5	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
RPL12	RPL18	A0A151MEY3	A0A151MG73	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L18.	0.998
RPL12	RPL18A	A0A151MEY3	A0A151PFJ2	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.	0.998
RPL12	RPL21	A0A151MEY3	A0A151MSE3	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L21.	0.999
RPL12	RPL23	A0A151MEY3	A0A151P5E7	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L23 isoform A; Belongs to the universal ribosomal protein uL14 family.	0.999
RPL12	RPL23A	A0A151MEY3	A0A151MUP1	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L23a.	0.999
RPL12	RPL24	A0A151MEY3	A0A151MDD7	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L24.	0.999
RPL12	RPL26L1	A0A151MEY3	A0A151M6Q5	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L26-like 1.	0.999
RPL12	RPL27	A0A151MEY3	A0A151PBI5	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
RPL12	RPL28	A0A151MEY3	A0A151MG96	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L28.	0.998
RPL12	RPL29	A0A151MEY3	A0A151NGG1	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L29.	0.998
RPL12	RPL30	A0A151MEY3	A0A151MY00	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L30.	0.999
RPL12	RPL31	A0A151MEY3	A0A151NWY9	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L31.	0.999
RPL12	RPL34	A0A151MEY3	A0A151MIU6	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L34.	0.999
RPL12	RPL35	A0A151MEY3	A0A151MZJ5	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L35.	0.999
RPL12	RPL36A	A0A151MEY3	A0A151NN60	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L36a isoform B; Belongs to the eukaryotic ribosomal protein eL42 family.	0.996
RPL12	RPL37	A0A151MEY3	A0A151MX61	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	Ribosomal protein L37; Binds to the 23S rRNA.	0.999
RPL12	RPL37A	A0A151MEY3	A0A151M167	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L37a.	0.998
RPL12	RPL38	A0A151MEY3	A0A151NW89	60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.	60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.	0.998