STRINGSTRING
ARID4A ARID4A Y1Q_0014762 Y1Q_0014762 ARID4B ARID4B MTA2 MTA2 HDAC7 HDAC7 HDAC6 HDAC6 Y1Q_0001537 Y1Q_0001537 HMG20A-1 HMG20A-1 PHF21A PHF21A CHD3 CHD3 MBD4 MBD4 GATAD2A GATAD2A Y1Q_0003810 Y1Q_0003810 REST REST HDAC9 HDAC9 Y1Q_0005204 Y1Q_0005204 MBD2 MBD2 TRPS1 TRPS1 HDAC11 HDAC11 RCOR2 RCOR2 CHD5 CHD5 CHD3-2 CHD3-2 SUDS3 SUDS3 PHF21B PHF21B CUNH17orf64 CUNH17orf64 Y1Q_0008697 Y1Q_0008697 Y1Q_0008702 Y1Q_0008702 Y1Q_0009658 Y1Q_0009658 HMG20B HMG20B MBD3 MBD3 BRMS1L BRMS1L WDR73-1 WDR73-1 MTA1-2 MTA1-2 AIRE AIRE ING1 ING1 ADNP ADNP NWD1 NWD1 ZNF217 ZNF217 MTA1 MTA1 RCOR3 RCOR3 MXD1 MXD1 HDAC8 HDAC8 RCOR1 RCOR1 SAP30 SAP30 HDAC4 HDAC4 HDAC10 HDAC10 ZMPSTE24 ZMPSTE24 GATAD2B GATAD2B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ARID4AAT-rich interactive domain-containing protein 4A isoform A. (951 aa)
Y1Q_0014762Tudor domain-containing protein. (305 aa)
ARID4BAT-rich interactive domain-containing protein 4B isoform B. (1316 aa)
MTA2Uncharacterized protein. (676 aa)
HDAC7Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1002 aa)
HDAC6Histone deacetylase 6. (794 aa)
Y1Q_0001537HDAC_interact domain-containing protein. (1175 aa)
HMG20A-1High mobility group protein 20A isoform A. (372 aa)
PHF21APHD finger protein 21A isoform D. (706 aa)
CHD3Chromodomain-helicase-DNA-binding protein 3. (1920 aa)
MBD4Methyl-CpG-binding domain protein 4. (565 aa)
GATAD2ATranscriptional repressor p66-alpha isoform C. (621 aa)
Y1Q_0003810Uncharacterized protein. (2463 aa)
RESTRE1-silencing transcription factor. (913 aa)
HDAC9Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1072 aa)
Y1Q_0005204Integrase catalytic domain-containing protein. (296 aa)
MBD2Methyl-CpG-binding domain protein 2. (222 aa)
TRPS1Zinc finger transcription factor Trps1. (880 aa)
HDAC11Histone deacetylase 11. (402 aa)
RCOR2REST corepressor 2. (424 aa)
CHD5Uncharacterized protein. (1864 aa)
CHD3-2Uncharacterized protein. (1966 aa)
SUDS3Sin3 histone deacetylase corepressor complex component SDS3. (336 aa)
PHF21BPHD finger protein 21B isoform B. (547 aa)
CUNH17orf64DUF4208 domain-containing protein. (262 aa)
Y1Q_0008697Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1020 aa)
Y1Q_0008702RT_RNaseH_2 domain-containing protein. (85 aa)
Y1Q_0009658RT_RNaseH_2 domain-containing protein. (177 aa)
HMG20BHigh mobility group 20B. (319 aa)
MBD3Methyl-CpG-binding domain protein 3. (329 aa)
BRMS1LBreast cancer metastasis-suppressor 1-like protein. (323 aa)
WDR73-1WD repeat-containing protein 73 isoform A. (359 aa)
MTA1-2Uncharacterized protein. (694 aa)
AIREAutoimmune regulator isoform B. (519 aa)
ING1Inhibitor of growth protein. (281 aa)
ADNPActivity-dependent neuroprotector homeobox protein. (1122 aa)
NWD1Tetraspanin. (2546 aa)
ZNF217Zinc finger protein 217. (548 aa)
MTA1Metastasis-associated protein MTA1. (590 aa)
RCOR3REST corepressor 3 isoform A. (604 aa)
MXD1Max dimerization protein 1. (237 aa)
HDAC8Histone deacetylase 8. (366 aa)
RCOR1REST corepressor 1. (382 aa)
SAP30Histone deacetylase complex subunit SAP30. (124 aa)
HDAC4Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1005 aa)
HDAC10Histone deacetylase 10. (686 aa)
ZMPSTE24CAAX prenyl protease 1-like protein. (1233 aa)
GATAD2BTranscriptional repressor p66-beta isoform B. (634 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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