18 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SETMARL	Histone-lysine N-methyltransferase SETMAR. (357 aa)
	EHMT2	Histone-lysine N-methyltransferase EHMT2 isoform A. (1311 aa)
	RYBP	RING1 and YY1-binding protein. (228 aa)
	CBX3	Chromobox protein-like protein 3. (173 aa)
	CBX5	Chromobox protein-like protein 5. (234 aa)
	MGA	MAX gene-associated protein isoform A. (3050 aa)
	L3MBTL2	Lethal(3)malignant brain tumor-like protein 2 isoform B. (653 aa)
	E2F6-1	Transcription factor E2F6 isoform C. (429 aa)
	CDYL	Chromodomain Y-like protein isoform B. (585 aa)
	L3MBTL2-2	FCS-type domain-containing protein. (733 aa)
	CDYL2	Chromodomain Y-like protein 2. (361 aa)
	SUV39H2	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily. (407 aa)
	PCGF6	Polycomb group RING finger protein 6. (327 aa)
	Y1Q_0012446	Uncharacterized protein. (535 aa)
	CBX1	Chromobox protein-like protein 1. (214 aa)
	YY1	Transcriptional repressor protein YY1. (243 aa)
	WIZ	Protein Wiz isoform A. (1906 aa)
	EHMT1	Histone-lysine N-methyltransferase EHMT1. (931 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBX1	CBX3	A0A151P6H0	A0A151MQK9	Chromobox protein-like protein 1.	Chromobox protein-like protein 3.	0.623
CBX1	CDYL2	A0A151P6H0	A0A151NM11	Chromobox protein-like protein 1.	Chromodomain Y-like protein 2.	0.712
CBX1	E2F6-1	A0A151P6H0	A0A151N8C9	Chromobox protein-like protein 1.	Transcription factor E2F6 isoform C.	0.623
CBX1	EHMT1	A0A151P6H0	A0A151PIL3	Chromobox protein-like protein 1.	Histone-lysine N-methyltransferase EHMT1.	0.751
CBX1	EHMT2	A0A151P6H0	A0A151MF43	Chromobox protein-like protein 1.	Histone-lysine N-methyltransferase EHMT2 isoform A.	0.751
CBX1	L3MBTL2	A0A151P6H0	A0A151N2N0	Chromobox protein-like protein 1.	Lethal(3)malignant brain tumor-like protein 2 isoform B.	0.680
CBX1	L3MBTL2-2	A0A151P6H0	A0A151NHI0	Chromobox protein-like protein 1.	FCS-type domain-containing protein.	0.680
CBX1	MGA	A0A151P6H0	A0A151MV14	Chromobox protein-like protein 1.	MAX gene-associated protein isoform A.	0.535
CBX1	PCGF6	A0A151P6H0	A0A151NUN1	Chromobox protein-like protein 1.	Polycomb group RING finger protein 6.	0.606
CBX1	RYBP	A0A151P6H0	A0A151MK91	Chromobox protein-like protein 1.	RING1 and YY1-binding protein.	0.550
CBX1	SETMARL	A0A151P6H0	A0A151MA26	Chromobox protein-like protein 1.	Histone-lysine N-methyltransferase SETMAR.	0.517
CBX1	SUV39H2	A0A151P6H0	A0A151NPM6	Chromobox protein-like protein 1.	Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.	0.730
CBX1	Y1Q_0012446	A0A151P6H0	A0A151P264	Chromobox protein-like protein 1.	Uncharacterized protein.	0.623
CBX3	CBX1	A0A151MQK9	A0A151P6H0	Chromobox protein-like protein 3.	Chromobox protein-like protein 1.	0.623
CBX3	CBX5	A0A151MQK9	A0A151MUN3	Chromobox protein-like protein 3.	Chromobox protein-like protein 5.	0.625
CBX3	CDYL2	A0A151MQK9	A0A151NM11	Chromobox protein-like protein 3.	Chromodomain Y-like protein 2.	0.422
CBX3	E2F6-1	A0A151MQK9	A0A151N8C9	Chromobox protein-like protein 3.	Transcription factor E2F6 isoform C.	0.846
CBX3	EHMT1	A0A151MQK9	A0A151PIL3	Chromobox protein-like protein 3.	Histone-lysine N-methyltransferase EHMT1.	0.869
CBX3	EHMT2	A0A151MQK9	A0A151MF43	Chromobox protein-like protein 3.	Histone-lysine N-methyltransferase EHMT2 isoform A.	0.869
CBX3	L3MBTL2	A0A151MQK9	A0A151N2N0	Chromobox protein-like protein 3.	Lethal(3)malignant brain tumor-like protein 2 isoform B.	0.680