71 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Y1Q_0024039	KIX domain-containing protein. (131 aa)
	NR4A1	Nuclear receptor subfamily 4 group A member 1. (579 aa)
	HOXD10	Homeobox protein Hox-D10 isoform A. (378 aa)
	Y1Q_0011681	cAMP-regulated phosphoprotein 21. (1117 aa)
	CCNT2	Cyclin-T2 isoform B; Belongs to the cyclin family. (351 aa)
	DLL1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (735 aa)
	VGLL2	Transcription cofactor vestigial-like protein 2. (283 aa)
	TCF21	Transcription factor 21. (179 aa)
	MEGF10	Uncharacterized protein. (1174 aa)
	COPS2	COP9 signalosome complex subunit 2 isoform B. (436 aa)
	MYOD1	Myogenic factor. (293 aa)
	BCL9	B-cell CLL/lymphoma 9 protein. (1427 aa)
	GPCPD1	Glycerophosphocholine phosphodiesterase GPCPD1 isoform A. (676 aa)
	ITM2B	Integral membrane protein 2B isoform B. (1151 aa)
	BVES	Blood vessel epicardial substance isoform A. (448 aa)
	POPDC3	Popeye domain-containing protein 3. (161 aa)
	CAV3	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (151 aa)
	FOS	Proto-oncogene c-Fos isoform A. (530 aa)
	Y1Q_0023568	Uncharacterized protein. (140 aa)
	SEPN1	Selenoprotein N isoform A. (400 aa)
	MSC	Musculin. (87 aa)
	MEOX2	Homeobox protein MOX-2. (207 aa)
	EOMES	Eomesodermin-like protein isoform B. (404 aa)
	ANKRD33	Ankyrin repeat domain-containing protein 33. (437 aa)
	R3HDM2	Uncharacterized protein. (730 aa)
	SOX8	Transcription factor SOX-8. (471 aa)
	DLL3	Delta-like protein 3. (230 aa)
	HLF	Hepatic leukemia factor. (294 aa)
	STAC3	SH3 and cysteine-rich domain-containing protein 3. (346 aa)
	MYL6-1	Myosin light polypeptide 6 isoform B. (151 aa)
	NF1	Neurofibromin isoform B. (2879 aa)
	VRK3-1	Inactive serine/threonine-protein kinase VRK3 isoform A. (407 aa)
	MYOG	Myogenin. (227 aa)
	DNER	Delta and Notch-like epidermal growth factor-related receptor. (565 aa)
	Y1Q_0004744	Protein kinase domain-containing protein. (161 aa)
	BTG2	Protein BTG2. (152 aa)
	TAZ	Tafazzin family protein; Belongs to the taffazin family. (277 aa)
	NPHS1L	Nephrin. (513 aa)
	FAM65B	Protein FAM65B isoform B. (1054 aa)
	BARX2	Homeobox protein BarH-like 2. (273 aa)
	CREBBP	CREB-binding protein isoform C. (2208 aa)
	MAFF	Transcription factor MafF. (149 aa)
	KEL	Kell blood group glycoprotein. (791 aa)
	KLF5	Krueppel-like factor 5. (365 aa)
	NPHS1	Nephrin isoform B. (597 aa)
	Y1Q_0019416	Uncharacterized protein. (271 aa)
	SMO	Smoothened-like protein; Belongs to the G-protein coupled receptor Fz/Smo family. (804 aa)
	ELN-1	Elastin isoform A. (387 aa)
	NEURL1	E3 ubiquitin-protein ligase NEURL1. (555 aa)
	LEMD2	LEM domain-containing protein 2. (282 aa)
	MEF2D	Myocyte-specific enhancer factor 2D. (518 aa)
	ANKRD1	Ankyrin repeat domain-containing protein 1. (319 aa)
	ANKRD33B	Ankyrin repeat domain-containing protein 33B. (518 aa)
	BCL9L-1	B-cell CLL/lymphoma 9-like protein isoform B. (1409 aa)
	HLX-1	H2.0-like homeobox protein isoform A. (362 aa)
	ATF3	Cyclic AMP-dependent transcription factor ATF-3. (220 aa)
	BIN3	Bridging integrator 3. (253 aa)
	KLF8L	Krueppel-like factor 5. (451 aa)
	ASB2	Ankyrin repeat and SOCS box protein 2. (687 aa)
	SMYD1	Histone-lysine N-methyltransferase SMYD1 isoform B. (486 aa)
	PHOX2B	Paired mesoderm homeobox protein 2B. (180 aa)
	SVIL	Supervillin isoform B. (1856 aa)
	KLHL40-2	BTB domain-containing protein. (619 aa)
	MYOZ2	Myozenin-2. (297 aa)
	CAV2	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (158 aa)
	CAV1	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (178 aa)
	MYF5	Myogenic factor. (207 aa)
	MYF6	Myogenic factor 6. (242 aa)
	HIVEP3	Transcription factor HIVEP3. (1103 aa)
	CHRND	Acetylcholine receptor subunit delta. (554 aa)
	HOMER1	Homer protein-like protein 1. (355 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKRD1	ASB2	A0A151NZL0	A0A151P8R8	Ankyrin repeat domain-containing protein 1.	Ankyrin repeat and SOCS box protein 2.	0.458
ASB2	ANKRD1	A0A151P8R8	A0A151NZL0	Ankyrin repeat and SOCS box protein 2.	Ankyrin repeat domain-containing protein 1.	0.458
ATF3	BTG2	A0A151P3J8	A0A151NBT9	Cyclic AMP-dependent transcription factor ATF-3.	Protein BTG2.	0.432
ATF3	FOS	A0A151P3J8	A0A151MLJ2	Cyclic AMP-dependent transcription factor ATF-3.	Proto-oncogene c-Fos isoform A.	0.818
ATF3	MAFF	A0A151P3J8	A0A151NHP4	Cyclic AMP-dependent transcription factor ATF-3.	Transcription factor MafF.	0.582
ATF3	NR4A1	A0A151P3J8	A0A151LYJ6	Cyclic AMP-dependent transcription factor ATF-3.	Nuclear receptor subfamily 4 group A member 1.	0.453
BTG2	ATF3	A0A151NBT9	A0A151P3J8	Protein BTG2.	Cyclic AMP-dependent transcription factor ATF-3.	0.432
BTG2	NR4A1	A0A151NBT9	A0A151LYJ6	Protein BTG2.	Nuclear receptor subfamily 4 group A member 1.	0.477
CAV1	CAV2	A0A151PF23	A0A151PEZ6	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.992
CAV1	CAV3	A0A151PF23	A0A151MKB4	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.902
CAV2	CAV1	A0A151PEZ6	A0A151PF23	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.992
CAV2	CAV3	A0A151PEZ6	A0A151MKB4	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.992
CAV3	CAV1	A0A151MKB4	A0A151PF23	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.902
CAV3	CAV2	A0A151MKB4	A0A151PEZ6	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.992
CCNT2	Y1Q_0004744	A0A151M0Q8	A0A151NBC9	Cyclin-T2 isoform B; Belongs to the cyclin family.	Protein kinase domain-containing protein.	0.478
CHRND	MYOG	A0A151PHB5	A0A151N8Y6	Acetylcholine receptor subunit delta.	Myogenin.	0.518
CREBBP	FOS	A0A151NHH3	A0A151MLJ2	CREB-binding protein isoform C.	Proto-oncogene c-Fos isoform A.	0.674
CREBBP	KLF5	A0A151NHH3	A0A151NL62	CREB-binding protein isoform C.	Krueppel-like factor 5.	0.457
CREBBP	KLF8L	A0A151NHH3	A0A151P7J3	CREB-binding protein isoform C.	Krueppel-like factor 5.	0.457
CREBBP	MEF2D	A0A151NHH3	A0A151NYT0	CREB-binding protein isoform C.	Myocyte-specific enhancer factor 2D.	0.503