STRINGSTRING
Y1Q_0020616 Y1Q_0020616 PCDH12 PCDH12 CDH17 CDH17 Y1Q_0015220 Y1Q_0015220 CDH5 CDH5 CDH11 CDH11 CDH16 CDH16 CDH7 CDH7 CDH20-2 CDH20-2 CDH19 CDH19 CDH8 CDH8 Y1Q_0023889 Y1Q_0023889 CDH22 CDH22 CDH10 CDH10 CDH9 CDH9 CDH6 CDH6 Y1Q_0017448 Y1Q_0017448 CDH12 CDH12 CDH20 CDH20
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Y1Q_0020616CA domain-containing protein. (174 aa)
PCDH12Protocadherin-12. (256 aa)
CDH17Cadherin-17. (875 aa)
Y1Q_0015220Cadherin-22; Cadherins are calcium-dependent cell adhesion proteins. (200 aa)
CDH5Cadherin-5; Cadherins are calcium-dependent cell adhesion proteins. (733 aa)
CDH11Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (792 aa)
CDH16Cadherin-16 isoform C. (851 aa)
CDH7Uncharacterized protein. (744 aa)
CDH20-2Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (800 aa)
CDH19Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (723 aa)
CDH8Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (668 aa)
Y1Q_0023889Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (629 aa)
CDH22Uncharacterized protein. (381 aa)
CDH10MHD domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins. (733 aa)
CDH9Uncharacterized protein. (426 aa)
CDH6Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (735 aa)
Y1Q_0017448Uncharacterized protein. (237 aa)
CDH12Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (527 aa)
CDH20Cadherin-20; Cadherins are calcium-dependent cell adhesion proteins. (724 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.