26 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	P3H4-1	Synaptonemal complex protein SC65 isoform A. (436 aa)
	CRTAP	Cartilage-associated protein. (361 aa)
	Y1Q_0022249	Uncharacterized protein. (598 aa)
	PLOD3	Fe2OG dioxygenase domain-containing protein. (711 aa)
	OGFOD2-1	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform B. (354 aa)
	EGLN3	Egl nine-like protein 3. (249 aa)
	PLOD2	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform A. (763 aa)
	METTL26	Uncharacterized protein. (164 aa)
	PLOD1	Fe2OG dioxygenase domain-containing protein. (727 aa)
	JMJD6	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6. (414 aa)
	PRDX4	Peroxiredoxin-4. (254 aa)
	P3H1	Prolyl 3-hydroxylase 1. (710 aa)
	OGFOD1	Prolyl 3-hydroxylase OGFOD1. (534 aa)
	ASPHL	Aspartate beta-hydroxylase isoform B. (392 aa)
	ASPH	Aspartyl/asparaginyl beta-hydroxylase. (464 aa)
	P3H2	Prolyl 3-hydroxylase 2. (552 aa)
	HIF1AN	Hypoxia-inducible factor 1-alpha inhibitor. (394 aa)
	P4HTM	Transmembrane prolyl 4-hydroxylase. (486 aa)
	P3H3	Prolyl 3-hydroxylase 3. (657 aa)
	VPS33B	Vacuolar protein sorting-associated protein 33B; Belongs to the STXBP/unc-18/SEC1 family. (615 aa)
	P4HA1	Prolyl 4-hydroxylase subunit alpha-1 isoform C. (577 aa)
	VIPAS39	Spermatogenesis-defective 39-like protein. (487 aa)
	EGLN1	Egl nine-like protein 1. (225 aa)
	JMJD4-1	JmjC domain-containing protein 4 isoform A. (450 aa)
	P4HA3	Prolyl 4-hydroxylase subunit alpha-3. (536 aa)
	FKBP10-2	Peptidylprolyl isomerase. (564 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASPH	ASPHL	A0A151MND5	A0A151MND7	Aspartyl/asparaginyl beta-hydroxylase.	Aspartate beta-hydroxylase isoform B.	0.900
ASPHL	ASPH	A0A151MND7	A0A151MND5	Aspartate beta-hydroxylase isoform B.	Aspartyl/asparaginyl beta-hydroxylase.	0.900
CRTAP	FKBP10-2	A0A151P3H2	A0A151PCF8	Cartilage-associated protein.	Peptidylprolyl isomerase.	0.764
CRTAP	P3H1	A0A151P3H2	A0A151N013	Cartilage-associated protein.	Prolyl 3-hydroxylase 1.	0.636
CRTAP	P3H2	A0A151P3H2	A0A151MM57	Cartilage-associated protein.	Prolyl 3-hydroxylase 2.	0.636
CRTAP	P3H3	A0A151P3H2	A0A151MCS9	Cartilage-associated protein.	Prolyl 3-hydroxylase 3.	0.722
CRTAP	PLOD2	A0A151P3H2	A0A151NAT2	Cartilage-associated protein.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform A.	0.703
EGLN3	HIF1AN	A0A151NKS7	A0A151MKS2	Egl nine-like protein 3.	Hypoxia-inducible factor 1-alpha inhibitor.	0.572
FKBP10-2	CRTAP	A0A151PCF8	A0A151P3H2	Peptidylprolyl isomerase.	Cartilage-associated protein.	0.764
FKBP10-2	P3H3	A0A151PCF8	A0A151MCS9	Peptidylprolyl isomerase.	Prolyl 3-hydroxylase 3.	0.719
FKBP10-2	PLOD2	A0A151PCF8	A0A151NAT2	Peptidylprolyl isomerase.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform A.	0.738
HIF1AN	EGLN3	A0A151MKS2	A0A151NKS7	Hypoxia-inducible factor 1-alpha inhibitor.	Egl nine-like protein 3.	0.572
JMJD4-1	OGFOD1	A0A151LZK4	A0A151MST4	JmjC domain-containing protein 4 isoform A.	Prolyl 3-hydroxylase OGFOD1.	0.541
JMJD4-1	OGFOD2-1	A0A151LZK4	A0A151NSG1	JmjC domain-containing protein 4 isoform A.	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform B.	0.495
OGFOD1	JMJD4-1	A0A151MST4	A0A151LZK4	Prolyl 3-hydroxylase OGFOD1.	JmjC domain-containing protein 4 isoform A.	0.541
OGFOD1	OGFOD2-1	A0A151MST4	A0A151NSG1	Prolyl 3-hydroxylase OGFOD1.	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform B.	0.539
OGFOD2-1	JMJD4-1	A0A151NSG1	A0A151LZK4	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform B.	JmjC domain-containing protein 4 isoform A.	0.495
OGFOD2-1	OGFOD1	A0A151NSG1	A0A151MST4	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform B.	Prolyl 3-hydroxylase OGFOD1.	0.539
P3H1	CRTAP	A0A151N013	A0A151P3H2	Prolyl 3-hydroxylase 1.	Cartilage-associated protein.	0.636
P3H1	P3H4-1	A0A151N013	A0A151PCM4	Prolyl 3-hydroxylase 1.	Synaptonemal complex protein SC65 isoform A.	0.636