Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABT1 | BRIX1 | A0A151NQ56 | A0A151MWS0 | Activator of basal transcription 1 isoform B. | Ribosome biogenesis BRX1-like protein. | 0.632 |
| ABT1 | DDX28 | A0A151NQ56 | A0A151MSF5 | Activator of basal transcription 1 isoform B. | Putative ATP-dependent RNA helicase DDX28. | 0.644 |
| ABT1 | PWP2 | A0A151NQ56 | A0A151NRI9 | Activator of basal transcription 1 isoform B. | Periodic tryptophan 2-like protein. | 0.798 |
| ABT1 | RPF2 | A0A151NQ56 | A0A151MJN6 | Activator of basal transcription 1 isoform B. | Ribosome production factor 2-like protein. | 0.475 |
| ABT1 | RRS1 | A0A151NQ56 | A0A151MNC8 | Activator of basal transcription 1 isoform B. | Ribosome biogenesis regulatory protein-like protein. | 0.540 |
| ADAR | AGO2 | A0A151MR80 | A0A151P872 | Double-stranded RNA-specific adenosine deaminase. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.437 |
| ADAR | DHX9 | A0A151MR80 | A0A151MI83 | Double-stranded RNA-specific adenosine deaminase. | ATP-dependent RNA helicase A. | 0.593 |
| ADAR | DICER1 | A0A151MR80 | A0A151P8N2 | Double-stranded RNA-specific adenosine deaminase. | Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. | 0.725 |
| AGO1 | AGO2 | A0A151PG32 | A0A151P872 | Uncharacterized protein; Belongs to the argonaute family. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.825 |
| AGO1 | DHX9 | A0A151PG32 | A0A151MI83 | Uncharacterized protein; Belongs to the argonaute family. | ATP-dependent RNA helicase A. | 0.430 |
| AGO1 | DICER1 | A0A151PG32 | A0A151P8N2 | Uncharacterized protein; Belongs to the argonaute family. | Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. | 0.937 |
| AGO2 | ADAR | A0A151P872 | A0A151MR80 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Double-stranded RNA-specific adenosine deaminase. | 0.437 |
| AGO2 | AGO1 | A0A151P872 | A0A151PG32 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Uncharacterized protein; Belongs to the argonaute family. | 0.825 |
| AGO2 | DDX20 | A0A151P872 | A0A151MTR3 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Putative ATP-dependent RNA helicase DDX20; Belongs to the DEAD box helicase family. | 0.770 |
| AGO2 | DHX9 | A0A151P872 | A0A151MI83 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | ATP-dependent RNA helicase A. | 0.799 |
| AGO2 | DICER1 | A0A151P872 | A0A151P8N2 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Endoribonuclease Dicer; Belongs to the helicase family. Dicer subfamily. | 0.986 |
| AGO2 | EIF2C3 | A0A151P872 | A0A151PGD9 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Protein argonaute-3; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. | 0.884 |
| AGO2 | EIF2C4 | A0A151P872 | A0A151PG51 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs; Belongs to the argonaute family. Ago subfamily. | 0.883 |
| AGO2 | GEMIN4 | A0A151P872 | A0A151NAA5 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Gem-associated protein 4. | 0.836 |
| ASCC3 | CCDC94 | A0A151MMC8 | A0A151NWP9 | Activating signal cointegrator 1 complex subunit 3. | Coiled-coil domain-containing protein 94. | 0.984 |
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