STRINGSTRING
CRB2 CRB2 ILK ILK PELO PELO Y1Q_0009747 Y1Q_0009747 RNF165 RNF165 ZNF423 ZNF423 ACVR1 ACVR1 SULF1-2 SULF1-2 BMPR2 BMPR2 TWSG1 TWSG1 CYR61 CYR61 KIAA1324L KIAA1324L FKBP8 FKBP8 TBX20 TBX20 MSX1 MSX1 KDR KDR NUMA1 NUMA1 SMAD4 SMAD4 ENG ENG CDH5 CDH5 Y1Q_0000060 Y1Q_0000060 UBE2O UBE2O FBXL15 FBXL15
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CRB2Crumbs-like protein 2 isoform A. (1508 aa)
ILKIntegrin-linked protein kinase. (452 aa)
PELOProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (385 aa)
Y1Q_0009747Mothers against decapentaplegic homolog. (517 aa)
RNF165RING finger protein 165. (268 aa)
ZNF423Uncharacterized protein. (1076 aa)
ACVR1Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (490 aa)
SULF1-2Extracellular sulfatase. (898 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1041 aa)
TWSG1Twisted gastrulation protein-like protein 1. (273 aa)
CYR61Protein CYR61. (374 aa)
KIAA1324LUncharacterized protein. (993 aa)
FKBP8Peptidylprolyl isomerase. (415 aa)
TBX20T-box transcription factor TBX20. (439 aa)
MSX1Homeobox protein MSX-1. (256 aa)
KDRUncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1353 aa)
NUMA1Nuclear mitotic apparatus protein 1. (2422 aa)
SMAD4Mothers against decapentaplegic homolog. (559 aa)
ENGEndoglin isoform B. (892 aa)
CDH5Cadherin-5; Cadherins are calcium-dependent cell adhesion proteins. (733 aa)
Y1Q_0000060Peptidylprolyl isomerase. (169 aa)
UBE2O(E3-independent) E2 ubiquitin-conjugating enzyme. (1225 aa)
FBXL15F-box/LRR-repeat protein 15. (258 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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