22 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	P3H2	Prolyl 3-hydroxylase 2. (552 aa)
	EGLN1	Egl nine-like protein 1. (225 aa)
	P4HA1	Prolyl 4-hydroxylase subunit alpha-1 isoform C. (577 aa)
	P3H3	Prolyl 3-hydroxylase 3. (657 aa)
	DBH	Dopamine beta-hydroxylase. (598 aa)
	P4HTM	Transmembrane prolyl 4-hydroxylase. (486 aa)
	OGFOD1	Prolyl 3-hydroxylase OGFOD1. (534 aa)
	P3H1	Prolyl 3-hydroxylase 1. (710 aa)
	OGFOD3	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3. (322 aa)
	PLOD1	Fe2OG dioxygenase domain-containing protein. (727 aa)
	METTL26	Uncharacterized protein. (164 aa)
	PLOD2	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform A. (763 aa)
	EGLN3	Egl nine-like protein 3. (249 aa)
	PHYH	Phytanoyl-CoA dioxygenase, peroxisomal. (335 aa)
	OGFOD2-1	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform B. (354 aa)
	PIGS	GPI transamidase component PIG-S. (437 aa)
	PLOD3	Fe2OG dioxygenase domain-containing protein. (711 aa)
	Y1Q_0022249	Uncharacterized protein. (598 aa)
	CRTAP	Cartilage-associated protein. (361 aa)
	P3H4-1	Synaptonemal complex protein SC65 isoform A. (436 aa)
	PAM	Peptidyl-glycine alpha-amidating monooxygenase isoform B. (871 aa)
	P4HA3	Prolyl 4-hydroxylase subunit alpha-3. (536 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRTAP	P3H1	A0A151P3H2	A0A151N013	Cartilage-associated protein.	Prolyl 3-hydroxylase 1.	0.636
CRTAP	P3H2	A0A151P3H2	A0A151MM57	Cartilage-associated protein.	Prolyl 3-hydroxylase 2.	0.636
CRTAP	P3H3	A0A151P3H2	A0A151MCS9	Cartilage-associated protein.	Prolyl 3-hydroxylase 3.	0.722
CRTAP	PLOD2	A0A151P3H2	A0A151NAT2	Cartilage-associated protein.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform A.	0.703
OGFOD1	OGFOD2-1	A0A151MST4	A0A151NSG1	Prolyl 3-hydroxylase OGFOD1.	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform B.	0.539
OGFOD2-1	OGFOD1	A0A151NSG1	A0A151MST4	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 isoform B.	Prolyl 3-hydroxylase OGFOD1.	0.539
P3H1	CRTAP	A0A151N013	A0A151P3H2	Prolyl 3-hydroxylase 1.	Cartilage-associated protein.	0.636
P3H1	P3H4-1	A0A151N013	A0A151PCM4	Prolyl 3-hydroxylase 1.	Synaptonemal complex protein SC65 isoform A.	0.636
P3H2	CRTAP	A0A151MM57	A0A151P3H2	Prolyl 3-hydroxylase 2.	Cartilage-associated protein.	0.636
P3H2	P3H4-1	A0A151MM57	A0A151PCM4	Prolyl 3-hydroxylase 2.	Synaptonemal complex protein SC65 isoform A.	0.636
P3H3	CRTAP	A0A151MCS9	A0A151P3H2	Prolyl 3-hydroxylase 3.	Cartilage-associated protein.	0.722
P3H3	P3H4-1	A0A151MCS9	A0A151PCM4	Prolyl 3-hydroxylase 3.	Synaptonemal complex protein SC65 isoform A.	0.658
P3H3	PLOD2	A0A151MCS9	A0A151NAT2	Prolyl 3-hydroxylase 3.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform A.	0.701
P3H4-1	P3H1	A0A151PCM4	A0A151N013	Synaptonemal complex protein SC65 isoform A.	Prolyl 3-hydroxylase 1.	0.636
P3H4-1	P3H2	A0A151PCM4	A0A151MM57	Synaptonemal complex protein SC65 isoform A.	Prolyl 3-hydroxylase 2.	0.636
P3H4-1	P3H3	A0A151PCM4	A0A151MCS9	Synaptonemal complex protein SC65 isoform A.	Prolyl 3-hydroxylase 3.	0.658
P4HA1	PLOD1	A0A151M743	A0A151N3V5	Prolyl 4-hydroxylase subunit alpha-1 isoform C.	Fe2OG dioxygenase domain-containing protein.	0.559
PLOD1	P4HA1	A0A151N3V5	A0A151M743	Fe2OG dioxygenase domain-containing protein.	Prolyl 4-hydroxylase subunit alpha-1 isoform C.	0.559
PLOD1	PLOD2	A0A151N3V5	A0A151NAT2	Fe2OG dioxygenase domain-containing protein.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform A.	0.966
PLOD1	PLOD3	A0A151N3V5	A0A151NWJ7	Fe2OG dioxygenase domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.967