STRINGSTRING
ITGB3-2 ITGB3-2 FERMT2L FERMT2L SKAP1 SKAP1 Y1Q_0004713 Y1Q_0004713 TGFB2 TGFB2 Y1Q_0016122 Y1Q_0016122 Y1Q_0016123 Y1Q_0016123 SERPINE1 SERPINE1 DEF6 DEF6 JAM3 JAM3 PODXL-1 PODXL-1 RLIM RLIM IFT74L IFT74L IFT74 IFT74 CIB1 CIB1 ITGB1BP1 ITGB1BP1 LIF LIF TESC TESC EPHA8 EPHA8 MUC1-2 MUC1-2 Y1Q_0015961 Y1Q_0015961 RET RET EFNA1 EFNA1 LYN LYN CRK CRK EPHA2 EPHA2 SYK-2 SYK-2 PTPN6 PTPN6 CYP1B1 CYP1B1 DPP4-2 DPP4-2 HRG HRG LRRC45 LRRC45
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ITGB3-2Integrin beta; Belongs to the integrin beta chain family. (783 aa)
FERMT2LFermitin family-like protein 2. (485 aa)
SKAP1Src kinase-associated phosphoprotein 1 isoform A. (349 aa)
Y1Q_0004713C-C motif chemokine 19-like. (72 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (413 aa)
Y1Q_0016122Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid. (80 aa)
Y1Q_0016123Uncharacterized protein. (157 aa)
SERPINE1Serpin E3-like; Belongs to the serpin family. (527 aa)
DEF6Differentially expressed in FDCP 6-like protein. (607 aa)
JAM3Junctional adhesion molecule C. (319 aa)
PODXL-1Podocalyxin isoform A. (328 aa)
RLIME3 ubiquitin-protein ligase RLIM. (2120 aa)
IFT74LIntraflagellar transport 74-like protein. (117 aa)
IFT74Intraflagellar transport 74-like protein. (378 aa)
CIB1Calcium and integrin-binding protein 1. (190 aa)
ITGB1BP1Integrin beta-1-binding protein 1. (200 aa)
LIFLeukemia inhibitory factor. (211 aa)
TESCCalcineurin B-like proteinous protein 3. (214 aa)
EPHA8Uncharacterized protein. (969 aa)
MUC1-2Uncharacterized protein. (143 aa)
Y1Q_0015961Uncharacterized protein; Belongs to the cytochrome P450 family. (247 aa)
RETProto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. (1103 aa)
EFNA1Ephrin-A1; Belongs to the ephrin family. (205 aa)
LYNTyrosine-protein kinase. (562 aa)
CRKAdapter molecule crk. (291 aa)
EPHA2Uncharacterized protein. (979 aa)
SYK-2Tyrosine-protein kinase. (608 aa)
PTPN6Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (613 aa)
CYP1B1Cytochrome P450 1B1; Belongs to the cytochrome P450 family. (551 aa)
DPP4-2Uncharacterized protein; Belongs to the peptidase S9B family. (992 aa)
HRGHistidine-rich glycoprotein. (428 aa)
LRRC45Leucine-rich repeat-containing protein 45. (777 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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