(14 nodes) Inner dynein arm assembly network (Alligator mississippiensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CCDC38	Coiled-coil domain-containing protein 38 isoform B. (580 aa)
	DNAAF2	Protein kintoun. (351 aa)
	CCDC103	Coiled-coil domain-containing protein 103 isoform B. (288 aa)
	LRRC6	TilB-like protein. (475 aa)
	DNAH2	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (2652 aa)
	PIH1D3	Protein PIH1D3. (197 aa)
	CCDC40	Coiled-coil domain-containing protein 40. (1131 aa)
	ZMYND10	Zinc finger MYND domain-containing protein 10 isoform A. (454 aa)
	DYX1C1	Dyslexia susceptibility 1 candidate 1 protein. (369 aa)
	CCDC39	Coiled-coil domain-containing protein 39. (955 aa)
	DNAAF5	Dynein assembly factor 5, axonemal isoform A. (742 aa)
	DNAAF1-1	Dynein assembly factor 1, axonemal. (755 aa)
	CFAP100	Coiled-coil domain-containing protein 37. (687 aa)
	TEKT2	Tektin-2 isoform B. (450 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCDC103	CCDC39	A0A151PC70	A0A151M6A4	Coiled-coil domain-containing protein 103 isoform B.	Coiled-coil domain-containing protein 39.	0.572
CCDC103	CCDC40	A0A151PC70	A0A151NKJ4	Coiled-coil domain-containing protein 103 isoform B.	Coiled-coil domain-containing protein 40.	0.561
CCDC103	DNAAF1-1	A0A151PC70	A0A151MLK1	Coiled-coil domain-containing protein 103 isoform B.	Dynein assembly factor 1, axonemal.	0.571
CCDC103	DNAAF5	A0A151PC70	A0A151N1N6	Coiled-coil domain-containing protein 103 isoform B.	Dynein assembly factor 5, axonemal isoform A.	0.549
CCDC103	DYX1C1	A0A151PC70	A0A151M9T8	Coiled-coil domain-containing protein 103 isoform B.	Dyslexia susceptibility 1 candidate 1 protein.	0.542
CCDC103	LRRC6	A0A151PC70	A0A151P823	Coiled-coil domain-containing protein 103 isoform B.	TilB-like protein.	0.587
CCDC103	PIH1D3	A0A151PC70	A0A151NNA5	Coiled-coil domain-containing protein 103 isoform B.	Protein PIH1D3.	0.469
CCDC103	ZMYND10	A0A151PC70	A0A151MEK3	Coiled-coil domain-containing protein 103 isoform B.	Zinc finger MYND domain-containing protein 10 isoform A.	0.582
CCDC39	CCDC103	A0A151M6A4	A0A151PC70	Coiled-coil domain-containing protein 39.	Coiled-coil domain-containing protein 103 isoform B.	0.572
CCDC39	CCDC40	A0A151M6A4	A0A151NKJ4	Coiled-coil domain-containing protein 39.	Coiled-coil domain-containing protein 40.	0.848
CCDC39	DNAAF1-1	A0A151M6A4	A0A151MLK1	Coiled-coil domain-containing protein 39.	Dynein assembly factor 1, axonemal.	0.641
CCDC39	DNAAF5	A0A151M6A4	A0A151N1N6	Coiled-coil domain-containing protein 39.	Dynein assembly factor 5, axonemal isoform A.	0.461
CCDC39	DYX1C1	A0A151M6A4	A0A151M9T8	Coiled-coil domain-containing protein 39.	Dyslexia susceptibility 1 candidate 1 protein.	0.473
CCDC39	LRRC6	A0A151M6A4	A0A151P823	Coiled-coil domain-containing protein 39.	TilB-like protein.	0.700
CCDC39	PIH1D3	A0A151M6A4	A0A151NNA5	Coiled-coil domain-containing protein 39.	Protein PIH1D3.	0.444
CCDC39	TEKT2	A0A151M6A4	A0A151PGB9	Coiled-coil domain-containing protein 39.	Tektin-2 isoform B.	0.452
CCDC39	ZMYND10	A0A151M6A4	A0A151MEK3	Coiled-coil domain-containing protein 39.	Zinc finger MYND domain-containing protein 10 isoform A.	0.572
CCDC40	CCDC103	A0A151NKJ4	A0A151PC70	Coiled-coil domain-containing protein 40.	Coiled-coil domain-containing protein 103 isoform B.	0.561
CCDC40	CCDC39	A0A151NKJ4	A0A151M6A4	Coiled-coil domain-containing protein 40.	Coiled-coil domain-containing protein 39.	0.848
CCDC40	DNAAF1-1	A0A151NKJ4	A0A151MLK1	Coiled-coil domain-containing protein 40.	Dynein assembly factor 1, axonemal.	0.669