STRINGSTRING
BTF3 BTF3 BTF3L4 BTF3L4 ABCF1 ABCF1 RPL24 RPL24 RPL18 RPL18 DHX9 DHX9 Y1Q_0014200 Y1Q_0014200 EIF3H EIF3H NUFIP2 NUFIP2 Y1Q_0000878 Y1Q_0000878 RPL6 RPL6 NR0B1 NR0B1 RPS21 RPS21 RPL19 RPL19 LARP4B LARP4B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BTF3Transcription factor BTF3; Belongs to the NAC-beta family. (223 aa)
BTF3L4Transcription factor BTF3; Belongs to the NAC-beta family. (158 aa)
ABCF1ATP-binding cassette sub-family F member 1. (927 aa)
RPL2460S ribosomal protein L24. (157 aa)
RPL1860S ribosomal protein L18. (188 aa)
DHX9ATP-dependent RNA helicase A. (1546 aa)
Y1Q_0014200Nuclear receptor subfamily 0 group B member 2-like. (369 aa)
EIF3HEukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (344 aa)
NUFIP2Nuclear fragile X mental retardation-interacting protein 2. (647 aa)
Y1Q_0000878Uncharacterized protein. (620 aa)
RPL660S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (257 aa)
NR0B1Nuclear receptor subfamily 0 group B member 1. (130 aa)
RPS2140S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (83 aa)
RPL19Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (196 aa)
LARP4BLa-related protein 4B. (725 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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