(76 nodes) Cadherin binding network (Alligator mississippiensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PKP4	Plakophilin-4 isoform C. (1185 aa)
	Y1Q_0019052	NumbF domain-containing protein. (153 aa)
	Y1Q_0020616	CA domain-containing protein. (174 aa)
	PTPRJ	Receptor-type tyrosine-protein phosphatase eta isoform A. (1187 aa)
	Y1Q_0019580	B-cadherin-like. (610 aa)
	Y1Q_0002887	Uncharacterized protein. (454 aa)
	PHLDB2	Pleckstrin-like proteiny-like domain family B member 2 isoform A. (1085 aa)
	OLFM4	Olfactomedin-4. (495 aa)
	Y1Q_0010417	Cadherin_C domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins. (208 aa)
	BZW1	Basic leucine zipper and W2 domain-containing protein 1. (419 aa)
	NUMBL	PID domain-containing protein. (157 aa)
	NUMB	Numb-like protein isoform A. (629 aa)
	Y1Q_0011409	Basic proline-rich protein-like. (131 aa)
	LRRC1	Leucine-rich repeat-containing protein 1 isoform G. (1689 aa)
	Y1Q_0005909	Olfactomedin-4. (468 aa)
	Y1Q_0007731	PH domain-containing protein. (272 aa)
	CDH17	Cadherin-17. (875 aa)
	Y1Q_0004916	Uncharacterized protein. (383 aa)
	CTNNA2-2	Uncharacterized protein. (603 aa)
	Y1Q_0015220	Cadherin-22; Cadherins are calcium-dependent cell adhesion proteins. (200 aa)
	CDH5	Cadherin-5; Cadherins are calcium-dependent cell adhesion proteins. (733 aa)
	CDH11	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (792 aa)
	PKP1	Plakophilin-1 isoform A. (731 aa)
	PTPRB	Receptor-type tyrosine-protein phosphatase beta. (2275 aa)
	BMPR2	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1041 aa)
	BZW1-2	W2 domain-containing protein. (450 aa)
	GLOD4	Glyoxalase domain-containing protein 4. (270 aa)
	CTNNAL1	Alpha-catulin isoform B. (769 aa)
	Y1Q_0007881	MAM domain-containing protein. (75 aa)
	CDH7	Uncharacterized protein. (744 aa)
	PTPRM-2	Uncharacterized protein. (1418 aa)
	CDH20-2	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (800 aa)
	CDH19	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (723 aa)
	PTPRO	Receptor-type tyrosine-protein phosphatase O isoform B. (1189 aa)
	PKP2	Plakophilin-2. (822 aa)
	CDH8	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (668 aa)
	CDH13	Cadherin-13. (712 aa)
	Y1Q_0023889	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (629 aa)
	CTNNA2	Catenin alpha-2 isoform A. (939 aa)
	ARVCF	Uncharacterized protein. (918 aa)
	GOLGA3	Golgin subfamily A member 3 isoform A. (1483 aa)
	P2RX4	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (369 aa)
	CTNND1	Catenin delta-1 isoform B. (996 aa)
	Y1Q_0013711	ZnMc domain-containing protein. (183 aa)
	Y1Q_0017734	Pleckstrin-like proteiny-like domain family B member 1. (89 aa)
	CDH22	Uncharacterized protein. (381 aa)
	UBFD1	Ubiquitin domain-containing protein UBFD1. (260 aa)
	MMP24	Matrix metalloproteinase-24. (379 aa)
	TXNDC9	Thioredoxin domain-containing protein 9. (226 aa)
	ARGLU1	Arginine and glutamate-rich protein 1. (186 aa)
	PKP3	Plakophilin-3. (833 aa)
	CDH4	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (869 aa)
	CDH26	Cadherin-like protein 26. (823 aa)
	PTPRT	Uncharacterized protein. (1414 aa)
	CDH1	Cadherin-1; Cadherins are calcium-dependent cell adhesion proteins. (834 aa)
	Y1Q_0016189	Uncharacterized protein. (77 aa)
	CTNND2	Uncharacterized protein. (729 aa)
	CDH10	MHD domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins. (733 aa)
	CDH9	Uncharacterized protein. (426 aa)
	CDH6	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (735 aa)
	Y1Q_0016187	Uncharacterized protein. (399 aa)
	Y1Q_0017448	Uncharacterized protein. (237 aa)
	CDH12	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (527 aa)
	CDH20	Cadherin-20; Cadherins are calcium-dependent cell adhesion proteins. (724 aa)
	CTNNB1	Catenin beta-1 isoform B. (783 aa)
	Y1Q_0015287	Uncharacterized protein. (282 aa)
	Y1Q_0015290	Uncharacterized protein. (143 aa)
	Y1Q_0015289	Uncharacterized protein. (128 aa)
	NDRG1	Protein NDRG1. (552 aa)
	KDR	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (1353 aa)
	JUP	Uncharacterized protein. (718 aa)
	LRRC1-2	Uncharacterized protein. (798 aa)
	PTPRR	Receptor-type tyrosine-protein phosphatase R. (2872 aa)
	CDH2	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (986 aa)
	CHMP5	Charged multivesicular body protein 5. (219 aa)
	CDH15	Cadherin-15; Cadherins are calcium-dependent cell adhesion proteins. (621 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARVCF	CDH1	A0A151NRN7	A0A151P0T5	Uncharacterized protein.	Cadherin-1; Cadherins are calcium-dependent cell adhesion proteins.	0.646
ARVCF	CDH10	A0A151NRN7	A0A151P207	Uncharacterized protein.	MHD domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins.	0.448
ARVCF	CDH11	A0A151NRN7	A0A151N7C6	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.648
ARVCF	CDH12	A0A151NRN7	A0A151P2H9	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.511
ARVCF	CDH13	A0A151NRN7	A0A151NM54	Uncharacterized protein.	Cadherin-13.	0.698
ARVCF	CDH15	A0A151NRN7	A0A151PIW7	Uncharacterized protein.	Cadherin-15; Cadherins are calcium-dependent cell adhesion proteins.	0.698
ARVCF	CDH17	A0A151NRN7	A0A151MY69	Uncharacterized protein.	Cadherin-17.	0.677
ARVCF	CDH2	A0A151NRN7	A0A151PH62	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.698
ARVCF	CDH20	A0A151NRN7	A0A151P2J2	Uncharacterized protein.	Cadherin-20; Cadherins are calcium-dependent cell adhesion proteins.	0.623
ARVCF	CDH4	A0A151NRN7	A0A151NZ00	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.698
ARVCF	CDH5	A0A151NRN7	A0A151N7C5	Uncharacterized protein.	Cadherin-5; Cadherins are calcium-dependent cell adhesion proteins.	0.790
ARVCF	CDH6	A0A151NRN7	A0A151P221	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.448
ARVCF	CDH7	A0A151NRN7	A0A151NEX3	Uncharacterized protein.	Uncharacterized protein.	0.605
ARVCF	CDH8	A0A151NRN7	A0A151NLZ1	Uncharacterized protein.	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.	0.605
ARVCF	CDH9	A0A151NRN7	A0A151P218	Uncharacterized protein.	Uncharacterized protein.	0.545
ARVCF	CTNNA2	A0A151NRN7	A0A151NQU8	Uncharacterized protein.	Catenin alpha-2 isoform A.	0.639
ARVCF	CTNNA2-2	A0A151NRN7	A0A151MYH6	Uncharacterized protein.	Uncharacterized protein.	0.639
ARVCF	CTNNAL1	A0A151NRN7	A0A151NCT1	Uncharacterized protein.	Alpha-catulin isoform B.	0.401
ARVCF	CTNNB1	A0A151NRN7	A0A151P2N9	Uncharacterized protein.	Catenin beta-1 isoform B.	0.858
ARVCF	JUP	A0A151NRN7	A0A151PC76	Uncharacterized protein.	Uncharacterized protein.	0.717