STRINGSTRING
ABCG1-2 ABCG1-2 ERLIN1 ERLIN1 APOB APOB SCAP SCAP SEC14L5 SEC14L5 SEC14L2 SEC14L2 LPCAT3 LPCAT3 FGF1-1 FGF1-1 ERLIN2 ERLIN2 ABCG1 ABCG1 SREBF2 SREBF2 SREBF1 SREBF1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ABCG1-2ABC transporter domain-containing protein. (666 aa)
ERLIN1Erlin-1. (335 aa)
APOBApolipoprotein B-100. (4482 aa)
SCAPSterol regulatory element-binding protein cleavage-activating protein. (1313 aa)
SEC14L5Uncharacterized protein. (755 aa)
SEC14L2SEC14-like protein 2. (409 aa)
LPCAT3Lysophospholipid acyltransferase 5; Belongs to the membrane-bound acyltransferase family. (474 aa)
FGF1-1Multifunctional fusion protein; Plays an important role in the regulation of cell survival, cell division, angiogenesis, cell differentiation and cell migration. Functions as potent mitogen in vitro. Acts as a ligand for FGFR1 and integrins. Binds to FGFR1 in the presence of heparin leading to FGFR1 dimerization and activation via sequential autophosphorylation on tyrosine residues which act as docking sites for interacting proteins, leading to the activation of several signaling cascades. Binds to integrins. Its binding to integrins and subsequent ternary complex formation with integr [...] (155 aa)
ERLIN2Erlin-2. (364 aa)
ABCG1ATP-binding cassette sub-family G member 1. (861 aa)
SREBF2Sterol regulatory element-binding protein 2 isoform A. (1079 aa)
SREBF1BHLH domain-containing protein. (1085 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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