(14 nodes) Mast cell activation network (Alligator mississippiensis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Y1Q_0019944	Prostaglandin D2 receptor-like. (97 aa)
	KIT-2	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. (947 aa)
	RHOH	Rho-related GTP-binding protein RhoH. (191 aa)
	NDRG1	Protein NDRG1. (552 aa)
	LCP2	Lymphocyte cytosolic protein 2. (539 aa)
	RAB44	Ras-related protein Rab-44. (3516 aa)
	RABGEF1	Rab5 GDP/GTP exchange factor isoform C. (554 aa)
	LAT2	Linker for activation of T-cells family member 2. (191 aa)
	SNAP23	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (209 aa)
	RASGRP1-2	Uncharacterized protein. (744 aa)
	CPLX2	Complexin-2. (119 aa)
	LYN	Tyrosine-protein kinase. (562 aa)
	LAT	Linker for activation of T-cells family member 1 isoform C. (191 aa)
	SYK-2	Tyrosine-protein kinase. (608 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CPLX2	SNAP23	A0A151MTF6	A0A151MV41	Complexin-2.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.469
KIT-2	LYN	A0A151PAL4	A0A151MNT0	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	Tyrosine-protein kinase.	0.750
LAT	LAT2	A0A151MLQ2	A0A151N5G6	Linker for activation of T-cells family member 1 isoform C.	Linker for activation of T-cells family member 2.	0.556
LAT	LCP2	A0A151MLQ2	A0A151NR34	Linker for activation of T-cells family member 1 isoform C.	Lymphocyte cytosolic protein 2.	0.878
LAT	LYN	A0A151MLQ2	A0A151MNT0	Linker for activation of T-cells family member 1 isoform C.	Tyrosine-protein kinase.	0.678
LAT	SYK-2	A0A151MLQ2	A0A151M807	Linker for activation of T-cells family member 1 isoform C.	Tyrosine-protein kinase.	0.870
LAT2	LAT	A0A151N5G6	A0A151MLQ2	Linker for activation of T-cells family member 2.	Linker for activation of T-cells family member 1 isoform C.	0.556
LAT2	LCP2	A0A151N5G6	A0A151NR34	Linker for activation of T-cells family member 2.	Lymphocyte cytosolic protein 2.	0.535
LAT2	LYN	A0A151N5G6	A0A151MNT0	Linker for activation of T-cells family member 2.	Tyrosine-protein kinase.	0.540
LAT2	SYK-2	A0A151N5G6	A0A151M807	Linker for activation of T-cells family member 2.	Tyrosine-protein kinase.	0.559
LCP2	LAT	A0A151NR34	A0A151MLQ2	Lymphocyte cytosolic protein 2.	Linker for activation of T-cells family member 1 isoform C.	0.878
LCP2	LAT2	A0A151NR34	A0A151N5G6	Lymphocyte cytosolic protein 2.	Linker for activation of T-cells family member 2.	0.535
LCP2	LYN	A0A151NR34	A0A151MNT0	Lymphocyte cytosolic protein 2.	Tyrosine-protein kinase.	0.767
LCP2	NDRG1	A0A151NR34	A0A151P858	Lymphocyte cytosolic protein 2.	Protein NDRG1.	0.424
LCP2	RASGRP1-2	A0A151NR34	A0A151MUW9	Lymphocyte cytosolic protein 2.	Uncharacterized protein.	0.610
LCP2	SYK-2	A0A151NR34	A0A151M807	Lymphocyte cytosolic protein 2.	Tyrosine-protein kinase.	0.912
LYN	KIT-2	A0A151MNT0	A0A151PAL4	Tyrosine-protein kinase.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.750
LYN	LAT	A0A151MNT0	A0A151MLQ2	Tyrosine-protein kinase.	Linker for activation of T-cells family member 1 isoform C.	0.678
LYN	LAT2	A0A151MNT0	A0A151N5G6	Tyrosine-protein kinase.	Linker for activation of T-cells family member 2.	0.540
LYN	LCP2	A0A151MNT0	A0A151NR34	Tyrosine-protein kinase.	Lymphocyte cytosolic protein 2.	0.767