STRINGSTRING
BDNF BDNF IST1 IST1 SEMA4D SEMA4D WNT3 WNT3 EFNA5 EFNA5 NGF NGF RND2 RND2 HOMER3L HOMER3L WNT3-2 WNT3-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BDNFBrain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (246 aa)
IST1IST1-like protein. (273 aa)
SEMA4DSemaphorin-4D; Belongs to the semaphorin family. (856 aa)
WNT3Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (336 aa)
EFNA5Ephrin-A5; Belongs to the ephrin family. (189 aa)
NGFBeta-nerve growth factor; Belongs to the NGF-beta family. (329 aa)
RND2Rho-related GTP-binding protein RhoN. (227 aa)
HOMER3LHomer protein-like protein 3 isoform A; Belongs to the semaphorin family. (569 aa)
WNT3-2Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (338 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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