16 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Y1Q_0016466	Uncharacterized protein. (4317 aa)
	PKD2	EF-hand domain-containing protein. (818 aa)
	NFKBIB	NF-kappa-B inhibitor beta. (109 aa)
	CCDC22	Coiled-coil domain-containing protein 22. (675 aa)
	GOPC	Golgi-associated PDZ and coiled-coil motif-containing protein. (421 aa)
	FAF1	FAS-associated factor 1. (745 aa)
	SRI	Sorcin. (194 aa)
	CREB3	Cyclic AMP-responsive element-binding protein 3. (368 aa)
	GET4	Golgi to ER traffic 4-like protein. (283 aa)
	PKD1	Polycystin-1. (4307 aa)
	NFKBIA	NF-kappa-B inhibitor alpha. (299 aa)
	LATS1	Serine/threonine-protein kinase LATS1 isoform A. (867 aa)
	PSMD10	26S proteasome non-ATPase regulatory subunit 10. (226 aa)
	DBN1	Drebrin. (729 aa)
	SUFU	Suppressor of fused homolog. (469 aa)
	YWHAB	14-3-3 protein beta/alpha; Belongs to the 14-3-3 family. (300 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LATS1	YWHAB	A0A151NLN7	A0A151NZU7	Serine/threonine-protein kinase LATS1 isoform A.	14-3-3 protein beta/alpha; Belongs to the 14-3-3 family.	0.545
NFKBIA	NFKBIB	A0A151NKE7	A0A151PIS4	NF-kappa-B inhibitor alpha.	NF-kappa-B inhibitor beta.	0.917
NFKBIB	NFKBIA	A0A151PIS4	A0A151NKE7	NF-kappa-B inhibitor beta.	NF-kappa-B inhibitor alpha.	0.917
PKD1	PKD2	A0A151N2I5	A0A151NMQ3	Polycystin-1.	EF-hand domain-containing protein.	0.941
PKD2	PKD1	A0A151NMQ3	A0A151N2I5	EF-hand domain-containing protein.	Polycystin-1.	0.941
PKD2	Y1Q_0016466	A0A151NMQ3	A0A151N2T3	EF-hand domain-containing protein.	Uncharacterized protein.	0.943
PSMD10	SUFU	A0A151NN67	A0A151NW40	26S proteasome non-ATPase regulatory subunit 10.	Suppressor of fused homolog.	0.404
SUFU	PSMD10	A0A151NW40	A0A151NN67	Suppressor of fused homolog.	26S proteasome non-ATPase regulatory subunit 10.	0.404
Y1Q_0016466	PKD2	A0A151N2T3	A0A151NMQ3	Uncharacterized protein.	EF-hand domain-containing protein.	0.943
YWHAB	LATS1	A0A151NZU7	A0A151NLN7	14-3-3 protein beta/alpha; Belongs to the 14-3-3 family.	Serine/threonine-protein kinase LATS1 isoform A.	0.545