18 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	STRA6	Stimulated by retinoic acid 6 protein-like protein. (720 aa)
	CSRNP1	Cysteine/serine-rich nuclear protein 1. (635 aa)
	MSX1	Homeobox protein MSX-1. (256 aa)
	ANKRD11	Ankyrin repeat domain-containing protein 11. (2899 aa)
	TGFB1	TGF_BETA_2 domain-containing protein. (242 aa)
	SGPL1	Sphingosine-1-phosphate lyase 1. (617 aa)
	DKK1	Dickkopf-related protein 1. (103 aa)
	CRISPLD1	Cysteine-rich secretory protein LCCL domain-containing 1. (503 aa)
	PAX9	Paired box protein Pax-9. (341 aa)
	Y1Q_0024039	KIX domain-containing protein. (131 aa)
	CREBBP	CREB-binding protein isoform C. (2208 aa)
	NIPBL	Nipped-B protein. (2617 aa)
	DLX5	Homeobox protein DLX-5. (266 aa)
	ASPHL	Aspartate beta-hydroxylase isoform B. (392 aa)
	CRISPLD1-2	Uncharacterized protein. (581 aa)
	TGFB3	Transforming growth factor beta; Belongs to the TGF-beta family. (415 aa)
	LEF1	Lymphoid enhancer-binding factor 1 isoform B. (391 aa)
	RAB3GAP1	Rab3 GTPase-activating protein catalytic subunit. (1012 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CREBBP	LEF1	A0A151NHH3	A0A151MJ72	CREB-binding protein isoform C.	Lymphoid enhancer-binding factor 1 isoform B.	0.963
CREBBP	TGFB1	A0A151NHH3	A0A151P039	CREB-binding protein isoform C.	TGF_BETA_2 domain-containing protein.	0.467
CRISPLD1	MSX1	A0A151NMA0	A0A151P9H3	Cysteine-rich secretory protein LCCL domain-containing 1.	Homeobox protein MSX-1.	0.459
CSRNP1	MSX1	A0A151PDK3	A0A151P9H3	Cysteine/serine-rich nuclear protein 1.	Homeobox protein MSX-1.	0.563
DKK1	LEF1	A0A151NZR5	A0A151MJ72	Dickkopf-related protein 1.	Lymphoid enhancer-binding factor 1 isoform B.	0.648
LEF1	CREBBP	A0A151MJ72	A0A151NHH3	Lymphoid enhancer-binding factor 1 isoform B.	CREB-binding protein isoform C.	0.963
LEF1	DKK1	A0A151MJ72	A0A151NZR5	Lymphoid enhancer-binding factor 1 isoform B.	Dickkopf-related protein 1.	0.648
LEF1	MSX1	A0A151MJ72	A0A151P9H3	Lymphoid enhancer-binding factor 1 isoform B.	Homeobox protein MSX-1.	0.654
LEF1	PAX9	A0A151MJ72	A0A151NL82	Lymphoid enhancer-binding factor 1 isoform B.	Paired box protein Pax-9.	0.463
LEF1	Y1Q_0024039	A0A151MJ72	A0A151NHX4	Lymphoid enhancer-binding factor 1 isoform B.	KIX domain-containing protein.	0.653
MSX1	CRISPLD1	A0A151P9H3	A0A151NMA0	Homeobox protein MSX-1.	Cysteine-rich secretory protein LCCL domain-containing 1.	0.459
MSX1	CSRNP1	A0A151P9H3	A0A151PDK3	Homeobox protein MSX-1.	Cysteine/serine-rich nuclear protein 1.	0.563
MSX1	LEF1	A0A151P9H3	A0A151MJ72	Homeobox protein MSX-1.	Lymphoid enhancer-binding factor 1 isoform B.	0.654
MSX1	PAX9	A0A151P9H3	A0A151NL82	Homeobox protein MSX-1.	Paired box protein Pax-9.	0.869
MSX1	TGFB3	A0A151P9H3	A0A151MLF6	Homeobox protein MSX-1.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.474
PAX9	LEF1	A0A151NL82	A0A151MJ72	Paired box protein Pax-9.	Lymphoid enhancer-binding factor 1 isoform B.	0.463
PAX9	MSX1	A0A151NL82	A0A151P9H3	Paired box protein Pax-9.	Homeobox protein MSX-1.	0.869
TGFB1	CREBBP	A0A151P039	A0A151NHH3	TGF_BETA_2 domain-containing protein.	CREB-binding protein isoform C.	0.467
TGFB1	TGFB3	A0A151P039	A0A151MLF6	TGF_BETA_2 domain-containing protein.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.972
TGFB1	Y1Q_0024039	A0A151P039	A0A151NHX4	TGF_BETA_2 domain-containing protein.	KIX domain-containing protein.	0.467