STRINGSTRING
WDR81 WDR81 ZRANB3 ZRANB3 Y1Q_0011682 Y1Q_0011682 ZBTB1 ZBTB1 SPRTN SPRTN TNFAIP3 TNFAIP3 AGL AGL MTF2 MTF2 BRDT BRDT PSMD4 PSMD4 FAM63A FAM63A SQSTM1 SQSTM1 SPIN1 SPIN1 UBQLN4 UBQLN4 CARM1 CARM1 Y1Q_0012701 Y1Q_0012701 ZFAND6 ZFAND6 PYGO1 PYGO1 OTUD7B OTUD7B FAN1 FAN1 FAM63B FAM63B UBL7 UBL7 PML PML RBBP5 RBBP5 RAG2 RAG2 ING4 ING4 PTPN6 PTPN6 MAEL MAEL MORC3 MORC3 BRWD1 BRWD1 PHF19 PHF19 BRD3A BRD3A PSME4 PSME4 CXXC1 CXXC1 TDRD3 TDRD3 RNF168 RNF168 RAD18 RAD18 TP53BP1-1 TP53BP1-1 RAD23A RAD23A LYN LYN SETD5 SETD5 JARID2 JARID2 IKBKG IKBKG CBX3 CBX3 BRD3 BRD3 BRD7 BRD7 PHIP PHIP ANKRD13D ANKRD13D CBX5 CBX5 PHF2 PHF2 HDGFRP2 HDGFRP2 KDM8 KDM8 BPTF BPTF SUZ12 SUZ12 L3MBTL2 L3MBTL2 Y1Q_0016368 Y1Q_0016368 MFSD11 MFSD11 FAAP20 FAAP20 PARP10 PARP10 LRWD1 LRWD1 ZZEF1 ZZEF1 CUNH17orf64 CUNH17orf64 GLYR1 GLYR1 FMR1-2 FMR1-2 DAXX DAXX RRP8 RRP8 ANKRD13B ANKRD13B Y1Q_0018101 Y1Q_0018101 Y1Q_0017188 Y1Q_0017188 RAD23B RAD23B CDYL CDYL L3MBTL2-2 L3MBTL2-2 CBX7-1 CBX7-1 PWP1 PWP1 TRIM24-2 TRIM24-2 KDM7A-2 KDM7A-2 KDM5A KDM5A ZZZ3 ZZZ3 DNAJB2 DNAJB2 TAB2 TAB2 CDYL2 CDYL2 RNF31 RNF31 MORC4 MORC4 THAP7-1 THAP7-1 ATRX ATRX BRWD3 BRWD3 PRPF8 PRPF8 DNAJC2 DNAJC2 KMT2E KMT2E OPTN OPTN KDM7A KDM7A NCAPD3 NCAPD3 UBXN1 UBXN1 CBX8 CBX8 CBX4 CBX4 CBX2 CBX2 UFD1L UFD1L ANKRD13A ANKRD13A OTUD7B-2 OTUD7B-2 VCP VCP CARM1-2 CARM1-2 YEATS2 YEATS2 TAB3 TAB3 PHF1 PHF1 BAG6 BAG6 Y1Q_0014591 Y1Q_0014591 ING1 ING1 MSH6 MSH6 Y1Q_0004499 Y1Q_0004499 ZMYND8 ZMYND8 FAM175A FAM175A IDE IDE CCDC101 CCDC101 BRE BRE ZRANB1 ZRANB1 FAM175B FAM175B Y1Q_0016694 Y1Q_0016694 Y1Q_0016695 Y1Q_0016695 CBX1 CBX1 Y1Q_0016697 Y1Q_0016697 MPHOSPH8 MPHOSPH8 TTLL12 TTLL12 BRCC3 BRCC3 ING2 ING2 ATRIP ATRIP NCAPG2 NCAPG2 ZMYND11 ZMYND11 ING3 ING3 YEATS4 YEATS4 LAPTM5 LAPTM5 BRD9 BRD9 BRD4 BRD4 CHD1 CHD1 RNF169 RNF169
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WDR81WD repeat-containing protein 81. (1715 aa)
ZRANB3DNA annealing helicase and endonuclease ZRANB3. (1022 aa)
Y1Q_0011682Uncharacterized protein. (82 aa)
ZBTB1Zinc finger and BTB domain-containing protein 1. (710 aa)
SPRTNSprT-like domain-containing protein Spartan. (495 aa)
TNFAIP3Tumor necrosis factor alpha-induced protein 3. (853 aa)
AGLGlycogen debranching enzyme isoform A. (2015 aa)
MTF2Metal-response element-binding transcription factor 2. (595 aa)
BRDTBromodomain testis-specific protein isoform B. (894 aa)
PSMD426S proteasome non-ATPase regulatory subunit 4 isoform A. (381 aa)
FAM63AProtein FAM63A. (520 aa)
SQSTM1Sequestosome-1. (457 aa)
SPIN1Spindlin-1. (262 aa)
UBQLN4Ubiquilin-4 isoform B. (581 aa)
CARM1Histone-arginine methyltransferase CARM1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (458 aa)
Y1Q_0012701Uncharacterized protein. (802 aa)
ZFAND6AN1-type zinc finger protein 6. (124 aa)
PYGO1Uncharacterized protein. (90 aa)
OTUD7BOTU domain-containing protein 7B. (843 aa)
FAN1Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family. (710 aa)
FAM63BProtein FAM63B. (315 aa)
UBL7Ubiquitin-like protein 7. (519 aa)
PMLProtein PML isoform B. (586 aa)
RBBP5Retinoblastoma-binding protein 5 isoform B. (539 aa)
RAG2V(D)J recombination activating protein 2 isoform A. (376 aa)
ING4Inhibitor of growth protein. (256 aa)
PTPN6Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (613 aa)
MAELMaelstrom-like protein. (409 aa)
MORC3MORC family CW-type zinc finger protein 3. (938 aa)
BRWD1Uncharacterized protein. (2471 aa)
PHF19PHD finger protein 19 isoform B. (588 aa)
BRD3ABromodomain-containing protein 3. (687 aa)
PSME4Proteasome activator complex subunit 4. (1808 aa)
CXXC1CXXC-type zinc finger protein 1 isoform A. (628 aa)
TDRD3Tudor domain-containing protein 3 isoform A. (743 aa)
RNF168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] (589 aa)
RAD18E3 ubiquitin-protein ligase RAD18. (512 aa)
TP53BP1-1Tumor suppressor p53-binding protein 1 isoform A. (2124 aa)
RAD23AUV excision repair RAD23-like protein A. (357 aa)
LYNTyrosine-protein kinase. (562 aa)
SETD5SET domain-containing protein 5. (1456 aa)
JARID2Protein Jumonji. (1183 aa)
IKBKGNF-kappa-B essential modulator. (542 aa)
CBX3Chromobox protein-like protein 3. (173 aa)
BRD3Bromodomain-containing protein 3 isoform B. (789 aa)
BRD7Bromodomain-containing protein 7 isoform A. (664 aa)
PHIPPH-interacting protein isoform B. (1788 aa)
ANKRD13DANK_REP_REGION domain-containing protein. (610 aa)
CBX5Chromobox protein-like protein 5. (234 aa)
PHF2JmjC domain-containing protein. (1094 aa)
HDGFRP2Hepatoma-derived growth factor-related protein 2. (649 aa)
KDM8Lysine-specific demethylase 8. (166 aa)
BPTFNucleosome-remodeling factor subunit BPTF. (2737 aa)
SUZ12Polycomb protein SUZ12. (667 aa)
L3MBTL2Lethal(3)malignant brain tumor-like protein 2 isoform B. (653 aa)
Y1Q_0016368DDT domain-containing protein. (114 aa)
MFSD11UNC93-like protein MFSD11. (448 aa)
FAAP20Fanconi anemia core complex-associated protein 20 isoform B. (140 aa)
PARP10Poly [ADP-ribose] polymerase. (1010 aa)
LRWD1Leucine-rich repeat and WD repeat-containing protein 1. (750 aa)
ZZEF1Zinc finger ZZ-type and EF-hand domain-containing protein 1. (2904 aa)
CUNH17orf64DUF4208 domain-containing protein. (262 aa)
GLYR1Putative oxidoreductase GLYR1. (565 aa)
FMR1-2Uncharacterized protein. (761 aa)
DAXXDeath domain-associated protein 6 isoform A. (758 aa)
RRP8Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (108 aa)
ANKRD13BANK_REP_REGION domain-containing protein. (332 aa)
Y1Q_0018101F-box/LRR-repeat protein 16-like. (543 aa)
Y1Q_0017188Uncharacterized protein. (164 aa)
RAD23BUV excision repair RAD23-like protein B. (397 aa)
CDYLChromodomain Y-like protein isoform B. (585 aa)
L3MBTL2-2FCS-type domain-containing protein. (733 aa)
CBX7-1Chromobox protein-like protein 7 isoform B. (252 aa)
PWP1Periodic tryptophan 1-like protein. (474 aa)
TRIM24-2Uncharacterized protein. (951 aa)
KDM7A-2Uncharacterized protein. (919 aa)
KDM5AUncharacterized protein. (1692 aa)
ZZZ3ZZ-type zinc finger-containing protein 3 isoform B. (951 aa)
DNAJB2DnaJ-like protein subfamily B member 2. (204 aa)
TAB2TGF-beta-activated kinase 1 and MAP3K7-binding protein 2. (276 aa)
CDYL2Chromodomain Y-like protein 2. (361 aa)
RNF31E3 ubiquitin-protein ligase RNF31. (955 aa)
MORC4CW-type domain-containing protein. (895 aa)
THAP7-1THAP domain-containing protein 8 isoform A. (758 aa)
ATRXTranscriptional regulator ATRX. (2331 aa)
BRWD3Uncharacterized protein. (1554 aa)
PRPF8Pre-mRNA-processing-splicing factor 8. (2260 aa)
DNAJC2DnaJ-like protein subfamily C member 2. (606 aa)
KMT2EHistone-lysine N-methyltransferase 2E isoform A. (1230 aa)
OPTNOptineurin. (546 aa)
KDM7ALysine-specific demethylase 7A isoform B. (987 aa)
NCAPD3Condensin-2 complex subunit D3; Regulatory subunit of the condensin-2 complex, a complex which establishes mitotic chromosome architecture and is involved in physical rigidity of the chromatid axis. (1470 aa)
UBXN1UBX domain-containing protein 1. (320 aa)
CBX8Chromobox protein-like protein 8. (366 aa)
CBX4E3 SUMO-protein ligase CBX4. (456 aa)
CBX2Chromobox protein-like protein 2. (350 aa)
UFD1LUbiquitin fusion degradation 1-like protein. (307 aa)
ANKRD13AAnkyrin repeat domain-containing protein 13A. (587 aa)
OTUD7B-2OTU domain-containing protein. (770 aa)
VCPUncharacterized protein; Belongs to the AAA ATPase family. (880 aa)
CARM1-2CARM1 domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (548 aa)
YEATS2YEATS domain-containing protein 2 isoform A. (1403 aa)
TAB3TGF-beta-activated kinase 1 and MAP3K7-binding protein 3. (368 aa)
PHF1PHD finger protein 1 isoform B. (569 aa)
BAG6Large proline-rich protein BAG6. (945 aa)
Y1Q_0014591Uncharacterized protein. (95 aa)
ING1Inhibitor of growth protein. (281 aa)
MSH6DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1340 aa)
Y1Q_0004499Uncharacterized protein. (568 aa)
ZMYND8Protein kinase C-binding protein 1 isoform A. (1197 aa)
FAM175ABRCA1-A complex subunit Abraxas. (407 aa)
IDEInsulin-degrading enzyme isoform A; Belongs to the peptidase M16 family. (1026 aa)
CCDC101SAGA-associated factor 29-like protein. (357 aa)
BREBRCA1-A complex subunit BRE. (398 aa)
ZRANB1Ubiquitin thioesterase ZRANB1. (747 aa)
FAM175BBRISC complex subunit Abro1. (414 aa)
Y1Q_0016694Ubiquilin-1-like. (588 aa)
Y1Q_0016695Ubiquitin-like domain-containing protein. (515 aa)
CBX1Chromobox protein-like protein 1. (214 aa)
Y1Q_0016697Ubiquilin-1-like. (432 aa)
MPHOSPH8M-phase phosphoprotein 8. (790 aa)
TTLL12Tubulin--tyrosine ligase-like protein 12. (627 aa)
BRCC3Lys-63-specific deubiquitinase BRCC36. (261 aa)
ING2Inhibitor of growth protein. (228 aa)
ATRIPATR-interacting protein. (672 aa)
NCAPG2Condensin-2 complex subunit G2. (1146 aa)
ZMYND11Zinc finger MYND domain-containing protein 11 isoform A. (643 aa)
ING3Inhibitor of growth protein 3 isoform A. (402 aa)
YEATS4YEATS domain-containing protein 4. (227 aa)
LAPTM5Lysosomal-associated transmembrane protein 5. (258 aa)
BRD9Bromodomain-containing protein 9 isoform B. (673 aa)
BRD4Bromodomain-containing protein 4 isoform B. (1369 aa)
CHD1Uncharacterized protein. (1812 aa)
RNF169E3 ubiquitin-protein ligase RNF169 isoform B. (626 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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