Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AGO2 | CNOT1 | A0A151P872 | A0A151MSK9 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | CCR4-NOT transcription complex subunit 1 isoform B. | 0.468 |
| AGO2 | TNRC6A | A0A151P872 | A0A151NVZ6 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Trinucleotide repeat-containing 6A protein isoform A. | 0.789 |
| AGO2 | TNRC6AL | A0A151P872 | A0A151N351 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Trinucleotide repeat-containing 6A protein isoform B. | 0.926 |
| AGO2 | TNRC6B | A0A151P872 | A0A151NHJ9 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Trinucleotide repeat-containing 6B protein isoform B. | 0.925 |
| AGO2 | Y1Q_0024054 | A0A151P872 | A0A151NHI2 | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | Uncharacterized protein. | 0.760 |
| CCDC61 | CNOT1 | A0A151MKK8 | A0A151MSK9 | Coiled-coil domain-containing protein 61; Belongs to the nanos family. | CCR4-NOT transcription complex subunit 1 isoform B. | 0.897 |
| CNOT1 | AGO2 | A0A151MSK9 | A0A151P872 | CCR4-NOT transcription complex subunit 1 isoform B. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.468 |
| CNOT1 | CCDC61 | A0A151MSK9 | A0A151MKK8 | CCR4-NOT transcription complex subunit 1 isoform B. | Coiled-coil domain-containing protein 61; Belongs to the nanos family. | 0.897 |
| CNOT1 | CNOT7 | A0A151MSK9 | A0A151PAJ2 | CCR4-NOT transcription complex subunit 1 isoform B. | CCR4-NOT transcription complex subunit 7. | 0.986 |
| CNOT1 | TNRC6A | A0A151MSK9 | A0A151NVZ6 | CCR4-NOT transcription complex subunit 1 isoform B. | Trinucleotide repeat-containing 6A protein isoform A. | 0.665 |
| CNOT1 | TNRC6AL | A0A151MSK9 | A0A151N351 | CCR4-NOT transcription complex subunit 1 isoform B. | Trinucleotide repeat-containing 6A protein isoform B. | 0.665 |
| CNOT1 | Y1Q_0024054 | A0A151MSK9 | A0A151NHI2 | CCR4-NOT transcription complex subunit 1 isoform B. | Uncharacterized protein. | 0.846 |
| CNOT1 | ZFP36L1 | A0A151MSK9 | A0A151MAZ0 | CCR4-NOT transcription complex subunit 1 isoform B. | Zinc finger protein 36, C3H1 type-like 1. | 0.831 |
| CNOT1 | ZFP36L2 | A0A151MSK9 | A0A151P3S5 | CCR4-NOT transcription complex subunit 1 isoform B. | Tis11B_N domain-containing protein. | 0.816 |
| CNOT7 | CNOT1 | A0A151PAJ2 | A0A151MSK9 | CCR4-NOT transcription complex subunit 7. | CCR4-NOT transcription complex subunit 1 isoform B. | 0.986 |
| CNOT7 | TNRC6A | A0A151PAJ2 | A0A151NVZ6 | CCR4-NOT transcription complex subunit 7. | Trinucleotide repeat-containing 6A protein isoform A. | 0.443 |
| CNOT7 | TNRC6AL | A0A151PAJ2 | A0A151N351 | CCR4-NOT transcription complex subunit 7. | Trinucleotide repeat-containing 6A protein isoform B. | 0.486 |
| CNOT7 | ZFP36L1 | A0A151PAJ2 | A0A151MAZ0 | CCR4-NOT transcription complex subunit 7. | Zinc finger protein 36, C3H1 type-like 1. | 0.435 |
| CNOT7 | ZFP36L2 | A0A151PAJ2 | A0A151P3S5 | CCR4-NOT transcription complex subunit 7. | Tis11B_N domain-containing protein. | 0.435 |
| TNRC6A | AGO2 | A0A151NVZ6 | A0A151P872 | Trinucleotide repeat-containing 6A protein isoform A. | Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include ago2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...] | 0.789 |
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