42 items (Alligator mississippiensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	IL18	Interleukin-18. (239 aa)
	Y1Q_0021018	RanBP-type and C3HC4-type zinc finger-containing protein 1-like. (176 aa)
	NMI-1	N-myc-interactor isoform A. (388 aa)
	CD86	T-lymphocyte activation antigen CD86. (344 aa)
	RPS3	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (278 aa)
	C1QTNF4	Complement C1q tumor necrosis factor-related protein 4. (374 aa)
	TRAF6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (576 aa)
	TRIM44	Tripartite motif-containing protein 44. (131 aa)
	APP	BPTI/Kunitz inhibitor domain-containing protein. (743 aa)
	RC3H2-2	Uncharacterized protein. (1160 aa)
	EIF2AK2	Interferon-induced, double-stranded RNA-activated protein kinase. (532 aa)
	RC3H2	Roquin-2 isoform C. (1099 aa)
	CUNH1orf210	LRRCT domain-containing protein. (392 aa)
	TRADD	Tumor necrosis factor receptor type 1-associated DEATH domain protein. (336 aa)
	IL1BL	Interleukin-1. (280 aa)
	Y1Q_0001844	Interleukin-1. (129 aa)
	CUNH20orf27	Uncharacterized protein. (174 aa)
	NOD1	Nucleotide-binding oligomerization domain-containing protein 1. (951 aa)
	GREM1	Gremlin-1. (216 aa)
	CCDC142	Coiled-coil domain-containing protein 142. (604 aa)
	PDCD4A	Programmed cell death 4a. (362 aa)
	ILK	Integrin-linked protein kinase. (452 aa)
	CUNH8orf4	TC1 domain-containing protein. (104 aa)
	Y1Q_0010566	RanBP-type and C3HC4-type zinc finger-containing protein 1-like. (155 aa)
	SHRPRBCK1R	RanBP-type and C3HC4-type zinc finger-containing protein 1 isoform A. (480 aa)
	CCL21	SCY domain-containing protein. (93 aa)
	LRRC19	Leucine-rich repeat-containing protein 19. (396 aa)
	CREBBP	CREB-binding protein isoform C. (2208 aa)
	Y1Q_0024039	KIX domain-containing protein. (131 aa)
	TNFSF14	Tumor necrosis factor ligand superfamily member 14; Belongs to the tumor necrosis factor family. (236 aa)
	SASH1	SAM and SH3 domain-containing protein 1 isoform B. (1296 aa)
	EDA-1	Ectodysplasin-A isoform C; Belongs to the tumor necrosis factor family. (264 aa)
	NFAT5	Nuclear factor of activated T-cells 5 isoform A. (858 aa)
	CD14	Monocyte differentiation antigen CD14. (461 aa)
	TNF	Tumor necrosis factor. (231 aa)
	PDCD4	Programmed cell death protein 4. (468 aa)
	RBCK1	RanBP-type and C3HC4-type zinc finger-containing protein 1 isoform B. (521 aa)
	EDAR	Tumor necrosis factor receptor superfamily member EDAR isoform A. (448 aa)
	PHB	Prohibitin. (273 aa)
	PTP4A3	Protein tyrosine phosphatase type IVA 3. (173 aa)
	TLR3	Toll-like receptor 3; Belongs to the Toll-like receptor family. (948 aa)
	IFI35	Interferon-induced protein. (378 aa)

Your Current Organism:

Alligator mississippiensis

NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APP	CREBBP	A0A151MDY4	A0A151NHH3	BPTI/Kunitz inhibitor domain-containing protein.	CREB-binding protein isoform C.	0.447
APP	IL1BL	A0A151MDY4	A0A151MMB8	BPTI/Kunitz inhibitor domain-containing protein.	Interleukin-1.	0.455
APP	Y1Q_0024039	A0A151MDY4	A0A151NHX4	BPTI/Kunitz inhibitor domain-containing protein.	KIX domain-containing protein.	0.447
CCDC142	PDCD4A	A0A151MVM0	A0A151MVS5	Coiled-coil domain-containing protein 142.	Programmed cell death 4a.	0.456
CD14	IL1BL	A0A151NQZ5	A0A151MMB8	Monocyte differentiation antigen CD14.	Interleukin-1.	0.422
CD14	TRAF6	A0A151NQZ5	A0A151MBD1	Monocyte differentiation antigen CD14.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.424
CD86	IL18	A0A151M1P5	A0A151NGB8	T-lymphocyte activation antigen CD86.	Interleukin-18.	0.552
CD86	IL1BL	A0A151M1P5	A0A151MMB8	T-lymphocyte activation antigen CD86.	Interleukin-1.	0.623
CD86	TLR3	A0A151M1P5	A0A151PAN3	T-lymphocyte activation antigen CD86.	Toll-like receptor 3; Belongs to the Toll-like receptor family.	0.412
CD86	Y1Q_0001844	A0A151M1P5	A0A151MMN1	T-lymphocyte activation antigen CD86.	Interleukin-1.	0.480
CREBBP	APP	A0A151NHH3	A0A151MDY4	CREB-binding protein isoform C.	BPTI/Kunitz inhibitor domain-containing protein.	0.447
EDA-1	EDAR	A0A151NNG2	A0A151NWT4	Ectodysplasin-A isoform C; Belongs to the tumor necrosis factor family.	Tumor necrosis factor receptor superfamily member EDAR isoform A.	0.989
EDAR	EDA-1	A0A151NWT4	A0A151NNG2	Tumor necrosis factor receptor superfamily member EDAR isoform A.	Ectodysplasin-A isoform C; Belongs to the tumor necrosis factor family.	0.989
EIF2AK2	IFI35	A0A151MHB2	A0A151PBH7	Interferon-induced, double-stranded RNA-activated protein kinase.	Interferon-induced protein.	0.626
EIF2AK2	NMI-1	A0A151MHB2	A0A151M0H5	Interferon-induced, double-stranded RNA-activated protein kinase.	N-myc-interactor isoform A.	0.529
EIF2AK2	TLR3	A0A151MHB2	A0A151PAN3	Interferon-induced, double-stranded RNA-activated protein kinase.	Toll-like receptor 3; Belongs to the Toll-like receptor family.	0.465
EIF2AK2	TRAF6	A0A151MHB2	A0A151MBD1	Interferon-induced, double-stranded RNA-activated protein kinase.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.676
IFI35	EIF2AK2	A0A151PBH7	A0A151MHB2	Interferon-induced protein.	Interferon-induced, double-stranded RNA-activated protein kinase.	0.626
IFI35	NMI-1	A0A151PBH7	A0A151M0H5	Interferon-induced protein.	N-myc-interactor isoform A.	0.874
IFI35	RPS3	A0A151PBH7	A0A151M3V5	Interferon-induced protein.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.968