STRINGSTRING
OTP OTP ZMPSTE24 ZMPSTE24 VEGFC VEGFC CTNNB1 CTNNB1 GLI3 GLI3 FZD3 FZD3 NES NES SMO SMO DRD2 DRD2 LHX1-2 LHX1-2 LHX1 LHX1 PTCHD2 PTCHD2 ZNF335 ZNF335 Y1Q_0018485 Y1Q_0018485 FOXG1 FOXG1 DLL4 DLL4 GPR56 GPR56 CX3CL1 CX3CL1 GLI1 GLI1 LYN LYN TOX TOX NR2E1 NR2E1 Y1Q_0003064 Y1Q_0003064 PAX6 PAX6 MDK MDK DISC1-1 DISC1-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OTPHomeobox protein orthopedia. (325 aa)
ZMPSTE24CAAX prenyl protease 1-like protein. (1233 aa)
VEGFCVascular endothelial growth factor C; Belongs to the PDGF/VEGF growth factor family. (414 aa)
CTNNB1Catenin beta-1 isoform B. (783 aa)
GLI3Uncharacterized protein. (1572 aa)
FZD3Frizzled-3; Belongs to the G-protein coupled receptor Fz/Smo family. (632 aa)
NESNestin; Belongs to the intermediate filament family. (1759 aa)
SMOSmoothened-like protein; Belongs to the G-protein coupled receptor Fz/Smo family. (804 aa)
DRD2D(2) dopamine receptor; Belongs to the G-protein coupled receptor 1 family. (434 aa)
LHX1-2Uncharacterized protein. (406 aa)
LHX1LIM/homeobox protein Lhx1. (402 aa)
PTCHD2Patched domain-containing protein 2 isoform A. (1339 aa)
ZNF335Zinc finger protein 335 isoform B. (1362 aa)
Y1Q_0018485Paired box protein Pax-6-like. (281 aa)
FOXG1Forkhead box protein G1. (172 aa)
DLL4Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (687 aa)
GPR56G-protein coupled receptor 56; Belongs to the G-protein coupled receptor 2 family. (699 aa)
CX3CL1Fractalkine. (118 aa)
GLI1Zinc finger protein GLI1. (476 aa)
LYNTyrosine-protein kinase. (562 aa)
TOXThymocyte selection-associated high mobility group box protein TOX. (526 aa)
NR2E1Nuclear receptor subfamily 2 group E member 1. (385 aa)
Y1Q_0003064Protein CIP2A. (877 aa)
PAX6Paired box protein Pax-6. (516 aa)
MDKMidkine. (156 aa)
DISC1-1Disrupted in schizophrenia 1 protein isoform A. (626 aa)
Your Current Organism:
Alligator mississippiensis
NCBI taxonomy Id: 8496
Other names: A. mississippiensis, American alligator
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